##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061966_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 31956 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.806890724746527 32.0 32.0 32.0 32.0 32.0 2 31.208599324070597 32.0 32.0 32.0 32.0 32.0 3 31.46085242208036 32.0 32.0 32.0 32.0 32.0 4 31.63058580548254 32.0 32.0 32.0 32.0 32.0 5 31.580923770184004 32.0 32.0 32.0 32.0 32.0 6 35.17968456627863 36.0 36.0 36.0 36.0 36.0 7 35.20396795593942 36.0 36.0 36.0 36.0 36.0 8 35.129334084366 36.0 36.0 36.0 36.0 36.0 9 35.141945174615095 36.0 36.0 36.0 36.0 36.0 10 35.07306922017774 36.0 36.0 36.0 36.0 36.0 11 35.16779321567155 36.0 36.0 36.0 36.0 36.0 12 35.14676430091376 36.0 36.0 36.0 36.0 36.0 13 35.134153210664664 36.0 36.0 36.0 36.0 36.0 14 35.075134560020025 36.0 36.0 36.0 36.0 36.0 15 35.11437601702341 36.0 36.0 36.0 36.0 36.0 16 35.12977218675679 36.0 36.0 36.0 36.0 36.0 17 35.08430341719865 36.0 36.0 36.0 36.0 36.0 18 35.09685192139192 36.0 36.0 36.0 36.0 36.0 19 35.04728376517712 36.0 36.0 36.0 36.0 36.0 20 34.97346351232945 36.0 36.0 36.0 36.0 36.0 21 34.90393040430592 36.0 36.0 36.0 36.0 36.0 22 34.95690950056328 36.0 36.0 36.0 36.0 36.0 23 34.982382025284764 36.0 36.0 36.0 36.0 36.0 24 34.95271623482288 36.0 36.0 36.0 36.0 36.0 25 34.936162223056705 36.0 36.0 36.0 36.0 36.0 26 34.90834272124171 36.0 36.0 36.0 32.0 36.0 27 34.966422581048946 36.0 36.0 36.0 36.0 36.0 28 34.957660533233195 36.0 36.0 36.0 36.0 36.0 29 34.91575916885718 36.0 36.0 36.0 32.0 36.0 30 34.847884591313054 36.0 36.0 36.0 32.0 36.0 31 34.831706095881835 36.0 36.0 36.0 32.0 36.0 32 34.80341719864814 36.0 36.0 36.0 32.0 36.0 33 34.68052947803229 36.0 36.0 36.0 32.0 36.0 34 34.569251470772315 36.0 36.0 36.0 32.0 36.0 35 34.56668544248341 36.0 36.0 36.0 32.0 36.0 36 34.518181249217676 36.0 36.0 36.0 32.0 36.0 37 34.49565026912004 36.0 36.0 36.0 32.0 36.0 38 34.47934660157717 36.0 36.0 36.0 32.0 36.0 39 34.38696958317687 36.0 36.0 36.0 32.0 36.0 40 34.36368757040931 36.0 36.0 36.0 32.0 36.0 41 34.295406183502315 36.0 36.0 36.0 32.0 36.0 42 34.23785830516961 36.0 36.0 36.0 32.0 36.0 43 34.13646889473026 36.0 36.0 36.0 32.0 36.0 44 33.96801852547252 36.0 36.0 36.0 32.0 36.0 45 33.89507447740643 36.0 36.0 36.0 32.0 36.0 46 33.68794592564777 36.0 36.0 36.0 27.0 36.0 47 33.502753786456374 36.0 36.0 36.0 21.0 36.0 48 33.37166729252723 36.0 36.0 36.0 21.0 36.0 49 33.296501439479286 36.0 36.0 36.0 14.0 36.0 50 32.86747402678683 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 2.0 22 5.0 23 16.0 24 21.0 25 71.0 26 140.0 27 261.0 28 448.0 29 701.0 30 942.0 31 1229.0 32 1775.0 33 2754.0 34 5087.0 35 18504.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.00964217512444 20.40509657828006 13.630529380458942 21.954731866136555 2 15.899987482788836 20.240330454374767 39.43234447365127 24.42733758918513 3 18.86969583176868 25.757291275503817 29.199524345975718 26.173488546751784 4 12.104143196895732 16.0533233195644 34.053072975341095 37.78946050819877 5 12.611090249092502 37.53285767930905 32.40080110151458 17.455250970083867 6 30.692201777443984 36.55338590562023 16.109650769808486 16.644761547127302 7 27.80072599824759 32.6323695080736 20.16522718738265 19.401677306296158 8 28.39216422581049 32.06596570284141 18.53173113030417 21.010138941043934 9 27.587933408436598 12.964701464513706 20.055701589685818 39.391663537363875 10 18.53173113030417 25.95130804856678 28.32331956440105 27.193641256728 11 34.25334835398674 23.68882213042934 21.222931530854925 20.834897984729004 12 24.267743146826888 25.059456753035427 28.364000500688448 22.30879959944924 13 30.122668669420456 20.597070972587307 27.21554637626737 22.06471398172487 14 23.497934660157714 19.44548754537489 27.506571535861813 29.55000625860558 15 25.83865314807861 25.237827012141693 25.416197271247963 23.50732256853173 16 22.496557766929527 27.365752910251594 25.03442233070472 25.103266992114158 17 20.38114907998498 26.57403930404306 27.58480410564526 25.460007510326697 18 21.34810364250845 24.712104143196896 30.604581299286522 23.335210915008137 19 24.02991613468519 23.04731505820503 30.814244586306174 22.108524220803606 20 24.374139441732382 22.03967955939417 31.01451996495181 22.571661033921643 21 25.231568406559017 21.13218174990612 31.005132056577793 22.631117786957066 22 24.33971711102766 22.49029916134685 31.030166478908498 22.139817248716987 23 22.947177368882212 23.122418325197145 31.706095881837527 22.224308424083112 24 22.93537787513691 23.55812861836958 30.74949147238304 22.757002034110467 25 22.83452246839404 23.094254600075104 30.96132181749906 23.109901114031793 26 21.942671172862685 23.635623982976593 31.145950682188005 23.27575416197271 27 21.24483665039429 23.379021154086868 32.93278257604206 22.44335961947678 28 21.767430216547755 23.93916635373639 31.562147953435975 22.731255476279884 29 21.498310176492677 23.519839779697083 31.850043810239082 23.13180623357116 30 21.535861809988734 24.499311553385905 30.88308924771561 23.08173738890975 31 22.045938164976846 23.992364501189133 30.7673050444361 23.19439228939792 32 21.06959569407936 24.627612967830768 31.183502315684063 23.11928902240581 33 22.612341970209037 23.68882213042934 31.377519088747025 22.321316810614594 34 22.35886844411065 23.438477907122294 30.94254600075103 23.26010764801602 35 21.858179997496556 24.101890098885967 30.369883589936165 23.67004631368131 36 21.726749280260357 24.90299161346852 30.6108399048692 22.75941920140193 37 22.534109400425585 25.103266992114158 29.625109525597697 22.73751408186256 38 22.543497308799598 25.391162848917258 30.676555263487295 21.388784578795843 39 22.262556720388048 24.168361758723204 30.862149898294476 22.706931622594272 40 21.92389535611466 24.759043685066967 30.188384028038552 23.128676930779825 41 22.405807985980726 25.760420578295157 29.831643509826012 22.00212792589811 42 21.36821681166677 26.22519872316455 29.548726294047693 22.857858171120988 43 21.833828821780628 25.90830855891097 29.047097480832416 23.21076513847598 44 21.00832446642048 26.003004318708143 29.96182011641735 23.026851098454028 45 22.681186631618473 25.857428964826635 28.21379396670422 23.247590436850672 46 22.778195018149955 26.70234071848792 26.855676555263486 23.663787708098635 47 22.03967955939417 27.234322193015398 27.309425460007507 23.416572787582925 48 22.60749827877574 26.991925893471862 26.76034299305251 23.64023283469988 49 22.64121420747927 27.128774839618213 27.385385698638707 22.84462525426381 50 21.864438603079233 27.234322193015398 27.7193641256728 23.18187507823257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 233.0 1 127.0 2 21.0 3 78.5 4 136.0 5 111.0 6 86.0 7 60.5 8 35.0 9 58.0 10 81.0 11 123.5 12 166.0 13 287.5 14 409.0 15 518.5 16 628.0 17 658.5 18 689.0 19 625.0 20 561.0 21 534.5 22 508.0 23 410.0 24 312.0 25 265.5 26 219.0 27 207.0 28 195.0 29 219.0 30 243.0 31 347.0 32 451.0 33 529.5 34 608.0 35 617.5 36 627.0 37 693.5 38 760.0 39 913.5 40 1067.0 41 1215.5 42 1364.0 43 1510.0 44 1656.0 45 1810.0 46 1964.0 47 1981.0 48 1998.0 49 2206.0 50 2414.0 51 2493.0 52 2572.0 53 2512.5 54 2453.0 55 2376.5 56 2300.0 57 2108.0 58 1916.0 59 1820.5 60 1725.0 61 1504.0 62 1283.0 63 1006.5 64 730.0 65 661.5 66 593.0 67 488.5 68 384.0 69 298.5 70 213.0 71 177.0 72 141.0 73 111.0 74 81.0 75 79.5 76 78.0 77 55.0 78 32.0 79 25.0 80 18.0 81 9.5 82 1.0 83 2.5 84 4.0 85 2.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04068093628739517 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0031293027913380897 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0031293027913380897 40 0.0 41 0.0 42 0.006258605582676179 43 0.0031293027913380897 44 0.006258605582676179 45 0.0 46 0.0 47 0.0 48 0.006258605582676179 49 0.0031293027913380897 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 31956.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.28113656277382 #Duplication Level Percentage of deduplicated Percentage of total 1 74.78935811673391 45.83176868193766 2 14.737272123780832 18.062335711603456 3 5.075831077975796 9.331580923770185 4 2.032375019149262 4.981850043810239 5 1.1029974978297503 3.3796470146451374 6 0.6485216769647143 2.3845287269996245 7 0.3166011336363172 1.358117411440731 8 0.229791145381198 1.1265490048817124 9 0.1378746872287188 0.7604205782951559 >10 0.8834192922432722 9.46927024658906 >50 0.025532349486799777 1.1328076104643885 >100 0.02042587958943982 2.181124045562649 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 249 0.7791963950431844 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 177 0.5538865940668419 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 137 0.42871448241331833 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 134 0.419326574039304 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 96 0.3004130679684566 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 82 0.25660282888972336 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 70 0.21905119539366627 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 62 0.19401677306296156 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 52 0.16272374514958068 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 46 0.14394792840155213 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45 0.14081862561021405 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43 0.13456002002753786 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 42 0.13143071723619978 No Hit CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAA 41 0.12830141444486168 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 38 0.11891350607084741 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 38 0.11891350607084741 No Hit CATCAGGATCGGTCGATGGTGCAGGTTACCCTTCCCACCTCCGTTCACTT 37 0.11578420327950933 No Hit ATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC 36 0.11265490048817123 No Hit ATCCTAAGCCATAGGGAAATTCCGTTTTAAAGTGCACACTCCGTGCCGCC 36 0.11265490048817123 No Hit GGTTAAGGTTGTTTCAACCCCAAGGCCTCTAATCATTCGCTTTACCTCAT 33 0.10326699211415696 No Hit GTGCACACTCCGTGCCGCCCGGCGAAAGGGAAACCGGTTAACATTCCGGT 33 0.10326699211415696 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33 0.10326699211415696 No Hit GTTATAGCCTGTGGTGATGCGGCGCGTCTCGGGTGAGGTCCGCGCTTCGG 33 0.10326699211415696 No Hit ATACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 32 0.10013768932281887 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 32 0.10013768932281887 No Hit GGCTATAACACTCCCCGAGGGGAGCTACATTCCTAAGGTCTTATCCGGCG 32 0.10013768932281887 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0031293027913380897 0.0 24 0.0 0.0 0.0 0.006258605582676179 0.0 25 0.0 0.0 0.0 0.006258605582676179 0.0 26 0.0 0.0 0.0 0.01564651395669045 0.0 27 0.0 0.0 0.0 0.01877581674802854 0.0 28 0.0 0.0 0.0 0.02190511953936663 0.0 29 0.0 0.0 0.0 0.02816372512204281 0.0 30 0.0 0.0 0.0 0.05632745024408562 0.0 31 0.0 0.0 0.0 0.0907497809488046 0.0 32 0.0 0.0 0.0 0.13456002002753786 0.0 33 0.0 0.0 0.0 0.16585304794091876 0.0 34 0.0 0.0 0.0 0.1814995618976092 0.0 35 0.0 0.0 0.0 0.2159218926023282 0.0 36 0.0 0.0 0.0 0.26286143447239957 0.0 37 0.0 0.0 0.0 0.2972837651771185 0.0 38 0.0 0.0 0.0 0.3598698210038803 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTGCCG 25 0.0023187837 35.2 10 ATGGATT 30 0.0056627663 29.333332 17 ATACATG 30 0.0056627663 29.333332 1 CATGGGG 90 2.1316562E-4 17.11111 4 TACATGG 250 0.0 15.84 2 ACATGGG 260 0.0 15.23077 3 GTACATG 220 6.5434506E-8 13.0 1 CGCAGAG 365 0.0 12.657534 7 CAGAGTA 370 0.0 12.486486 9 AGAGTAC 370 0.0 12.486486 10 GCAGAGT 370 0.0 12.486486 8 AACGCAG 375 0.0 12.320001 5 ACGCAGA 375 0.0 12.320001 6 GGTATCA 200 4.318332E-6 12.1 1 ATCAACG 395 0.0 11.696202 2 GTATCAA 265 5.7556463E-8 11.622642 1 TATCAAC 385 5.456968E-12 11.428572 1 AGTACAT 155 9.783811E-4 11.354838 12 TCAACGC 420 1.8189894E-12 10.999999 3 GAGTACA 165 0.0016499237 10.666667 11 >>END_MODULE