SRR4061965_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4061965_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	93596
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	614	0.6560109406384889	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	578	0.6175477584512159	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	373	0.3985213043292448	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	349	0.37287918287106286	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	291	0.3109107226804564	No Hit
TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA	197	0.21047908030257706	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	192	0.20513697166545578	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.20193170648318304	No Hit
ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA	168	0.17949485020727382	No Hit
ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	164	0.1752211632975768	No Hit
GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA	125	0.1335527159280311	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG	124	0.13248429420060687	No Hit
CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAA	118	0.12607376383606136	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	107	0.11432112483439465	No Hit
GTTATAGCCTGTGGTGATGCGGCGCGTCTCGGGTGAGGTCCGCGCTTCGG	107	0.11432112483439465	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	106	0.11325270310697039	No Hit
GGTTAAGGTTGTTTCAACCCCAAGGCCTCTAATCATTCGCTTTACCTCAT	96	0.10256848583272789	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACATG	45	2.3121174E-8	39.11016	1
GTCTAGA	30	1.2921623E-4	36.665775	39
TGTCTAG	30	1.2921623E-4	36.665775	38
ACAGTGC	25	0.0023420283	35.199146	8
TTATAGC	25	0.0023420283	35.199146	4
TAGATGA	35	3.1958497E-4	31.427807	42
ACATGGT	30	0.0057189865	29.33262	10
TGGGTGG	55	4.898073E-6	27.99932	6
TCTAGAT	40	6.984414E-4	27.499332	40
GGCATAG	40	6.984414E-4	27.499332	6
ATAGTTC	40	6.984414E-4	27.499332	9
CTGTCTA	45	0.0013888024	24.44385	37
CATAGTT	45	0.0013888024	24.44385	8
AGGCATA	45	0.0013888024	24.44385	5
CTTCTAG	45	0.0013888024	24.44385	1
GCATAGT	45	0.0013888024	24.44385	7
TTCAGGC	55	1.5786094E-4	23.999416	2
ATATCAA	65	1.7906432E-5	23.691732	1
GAGTGAT	50	0.0025632093	21.999466	7
ACTTCCA	50	0.0025632093	21.999466	16