##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061965_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 93596 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.81721441087226 32.0 32.0 32.0 32.0 32.0 2 31.221558613615965 32.0 32.0 32.0 32.0 32.0 3 31.4499337578529 32.0 32.0 32.0 32.0 32.0 4 31.607216120347022 32.0 32.0 32.0 32.0 32.0 5 31.553827086627635 32.0 32.0 32.0 32.0 32.0 6 35.13784777127228 36.0 36.0 36.0 36.0 36.0 7 35.11120133339032 36.0 36.0 36.0 36.0 36.0 8 35.07577246890893 36.0 36.0 36.0 36.0 36.0 9 35.10624385657507 36.0 36.0 36.0 36.0 36.0 10 35.02191332962947 36.0 36.0 36.0 36.0 36.0 11 35.1501987264413 36.0 36.0 36.0 36.0 36.0 12 35.068795675028845 36.0 36.0 36.0 36.0 36.0 13 35.079031155177574 36.0 36.0 36.0 36.0 36.0 14 35.00142100089747 36.0 36.0 36.0 36.0 36.0 15 35.0627590922689 36.0 36.0 36.0 36.0 36.0 16 35.06489593572375 36.0 36.0 36.0 36.0 36.0 17 35.01929569639728 36.0 36.0 36.0 36.0 36.0 18 35.02150732937305 36.0 36.0 36.0 36.0 36.0 19 34.96360955596393 36.0 36.0 36.0 36.0 36.0 20 34.897281935125434 36.0 36.0 36.0 32.0 36.0 21 34.846991324415576 36.0 36.0 36.0 32.0 36.0 22 34.88502713791188 36.0 36.0 36.0 32.0 36.0 23 34.92041326552417 36.0 36.0 36.0 32.0 36.0 24 34.89736740886363 36.0 36.0 36.0 32.0 36.0 25 34.89443993333048 36.0 36.0 36.0 32.0 36.0 26 34.8544061712039 36.0 36.0 36.0 32.0 36.0 27 34.88412966366084 36.0 36.0 36.0 32.0 36.0 28 34.85382922347109 36.0 36.0 36.0 32.0 36.0 29 34.8032608231121 36.0 36.0 36.0 32.0 36.0 30 34.77259711953502 36.0 36.0 36.0 32.0 36.0 31 34.7647228514039 36.0 36.0 36.0 32.0 36.0 32 34.693565964357454 36.0 36.0 36.0 32.0 36.0 33 34.601414590367106 36.0 36.0 36.0 32.0 36.0 34 34.52175306637036 36.0 36.0 36.0 32.0 36.0 35 34.48996751997949 36.0 36.0 36.0 32.0 36.0 36 34.4823710414975 36.0 36.0 36.0 32.0 36.0 37 34.46852429591008 36.0 36.0 36.0 32.0 36.0 38 34.42406726783196 36.0 36.0 36.0 32.0 36.0 39 34.35832727894354 36.0 36.0 36.0 32.0 36.0 40 34.313378776870806 36.0 36.0 36.0 32.0 36.0 41 34.25364331809052 36.0 36.0 36.0 32.0 36.0 42 34.182561220564985 36.0 36.0 36.0 32.0 36.0 43 34.10674601478696 36.0 36.0 36.0 32.0 36.0 44 33.97551177400744 36.0 36.0 36.0 32.0 36.0 45 33.862739860677806 36.0 36.0 36.0 32.0 36.0 46 33.73706141288089 36.0 36.0 36.0 32.0 36.0 47 33.597653745886575 36.0 36.0 36.0 27.0 36.0 48 33.497467840506005 36.0 36.0 36.0 21.0 36.0 49 33.34928843112954 36.0 36.0 36.0 21.0 36.0 50 32.98658062310355 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 5.0 20 6.0 21 6.0 22 19.0 23 52.0 24 87.0 25 185.0 26 400.0 27 823.0 28 1356.0 29 2014.0 30 2876.0 31 3855.0 32 5362.0 33 8141.0 34 15301.0 35 53107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.860624198375376 19.709277469003847 12.918982471141513 23.511115861479265 2 15.881190234521075 21.27357230621294 38.15054222981997 24.69469522944602 3 18.664259156374204 27.245822471045773 28.427496901576994 25.662421471003032 4 12.360570964571135 16.22398393093722 33.98649514936536 37.42894995512629 5 13.574298046925081 37.76977648617462 31.046198555493827 17.60972691140647 6 30.329287576392154 36.70883371084234 16.867173810846616 16.094704901918885 7 27.641138510192743 32.467199452968075 19.495491260310267 20.396170776528912 8 28.396512671481688 31.25560921406898 19.185648959357238 21.162229155092096 9 28.75336552844139 13.029402965938717 19.26364374545921 38.95358776016069 10 17.56378477712723 26.648574725415614 28.128338817898204 27.659301679558958 11 35.20342749690158 23.22214624556605 21.146202829180734 20.42822342835164 12 24.823710414974997 24.73396298987136 27.86764391640668 22.574682678746953 13 29.359160647890935 21.261592375742552 26.598358904226675 22.780888072139835 14 24.058720458139238 18.721953929655115 27.208427710585926 30.010897901619728 15 26.325911363733496 25.461558186247274 24.671994529680756 23.540535920338478 16 23.06081456472499 27.22765930167956 24.334373263814694 25.377152869780762 17 21.133381768451642 25.45728449933758 26.649643147143042 26.759690585067737 18 21.657139804476735 24.897697526577275 29.553929162882632 23.891233506063358 19 24.601478695670757 23.01380400871832 29.835676738322153 22.549040557288773 20 25.81734262147955 21.69857686225907 28.752297106713964 23.731783409547415 21 25.73400572674046 22.05008761058165 29.25338689687593 22.962519765801957 22 24.58972605666909 22.918714474977563 29.14654472413351 23.34501474421984 23 23.241377836659684 23.374930552587717 30.11667165263473 23.267019958117867 24 23.61715085529901 24.079792292158604 29.181669569305395 23.121387283236995 25 23.59929911534681 24.081157314415147 29.11662891576563 23.202914654472416 26 23.04610289011165 23.70746300550243 29.106255676051074 24.140178428334846 27 22.63368769699236 24.575030717452854 29.699236070302902 23.092045515251883 28 22.22364681496677 24.26330747697502 29.804260956898947 23.70878475115926 29 22.357793068079832 24.006367793495446 29.970297875977607 23.665541262447114 30 22.51936535071318 24.334633260323734 29.353063732036965 23.79293765692612 31 22.95076712680029 24.638873456130604 28.613402282148808 23.796957134920298 32 21.83319799991453 24.46472071456045 29.57391341510321 24.128167870421812 33 23.12171460318817 24.449762810376512 29.404034360442754 23.024488225992563 34 22.810803880507713 24.101457327236204 29.489508098636698 23.598230693619385 35 22.257599230728136 24.723542924301512 29.001549228057055 24.017308616913297 36 22.969998717893926 25.227573827941363 28.77900764989957 23.02341980426514 37 23.161246207102867 25.21475276721227 28.38689687593487 23.23710414974999 38 23.1494935681012 25.51925295952818 28.692465489978204 22.63878798239241 39 23.20505149792726 24.837599897431513 28.628360186332753 23.328988418308473 40 22.45822471045771 25.589768793538187 28.50335484422411 23.44865165177999 41 22.78113147069822 25.89668251509162 28.328436348095522 22.993749666114642 42 22.86462228870606 26.544502617801047 27.886526338284007 22.70434875520889 43 22.51901871954868 26.316351824942302 27.624155910761605 23.540473544747414 44 22.168203528192414 26.299030869012384 27.94666039812371 23.58610520467149 45 23.49352536433181 26.09620069233728 26.494721996666527 23.915551946664387 46 23.20932518483696 26.800290610709858 26.34621137655455 23.644172827898625 47 23.116619477536194 26.899941236177145 26.707623270473853 23.27581601581281 48 23.223635003739716 27.73373223635004 25.448231648680412 23.594401111229832 49 23.582960264122317 27.54052119282425 25.526481681322323 23.350036861731112 50 22.940573113661134 27.746436737397694 25.250550248947583 24.06243989999359 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 893.0 1 478.0 2 63.0 3 181.5 4 300.0 5 272.0 6 244.0 7 159.5 8 75.0 9 140.5 10 206.0 11 318.5 12 431.0 13 813.0 14 1195.0 15 1418.5 16 1642.0 17 1600.5 18 1559.0 19 1464.0 20 1369.0 21 1337.0 22 1305.0 23 1095.5 24 886.0 25 685.0 26 484.0 27 498.0 28 512.0 29 568.0 30 624.0 31 842.0 32 1060.0 33 1349.5 34 1639.0 35 1751.5 36 1864.0 37 1863.0 38 1862.0 39 2237.0 40 2612.0 41 3157.5 42 3703.0 43 4011.5 44 4320.0 45 4809.0 46 5298.0 47 5840.5 48 6383.0 49 6973.5 50 7564.0 51 7683.0 52 7802.0 53 7632.0 54 7462.0 55 7530.0 56 7598.0 57 6839.0 58 6080.0 59 5513.0 60 4946.0 61 4387.5 62 3829.0 63 3098.5 64 2368.0 65 2089.0 66 1810.0 67 1514.5 68 1219.0 69 1023.0 70 827.0 71 730.0 72 633.0 73 515.0 74 397.0 75 338.0 76 279.0 77 211.0 78 143.0 79 103.0 80 63.0 81 42.0 82 21.0 83 14.5 84 8.0 85 5.5 86 3.0 87 3.5 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 2.0 96 2.0 97 2.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03846318218727296 2 0.0010684217274242488 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0010684217274242488 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0032052651822727465 25 0.0 26 0.0010684217274242488 27 0.0010684217274242488 28 0.0021368434548484977 29 0.0 30 0.0010684217274242488 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0010684217274242488 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0010684217274242488 42 0.006410530364545493 43 0.004273686909696995 44 0.007478952091969742 45 0.0 46 0.0 47 0.0010684217274242488 48 0.006410530364545493 49 0.0032052651822727465 50 0.0021368434548484977 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 93596.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.46899440147015 #Duplication Level Percentage of deduplicated Percentage of total 1 67.79335219541694 33.53668960211975 2 16.12492170795447 15.953673233898884 3 6.619727435692534 9.82413778366597 4 3.3001447052979413 6.530193598017009 5 1.879009092676184 4.647634514295483 6 1.0842098442798211 3.2180862430018378 7 0.7192069285760567 2.490491046625924 8 0.44491479665665973 1.7607590067951624 9 0.34988445173970323 1.5577588785845549 >10 1.5593615688646034 13.539040129920082 >50 0.0907107837843675 2.879396555408351 >100 0.030236927928122503 2.78858070857729 >500 0.004319561132588929 1.2735586990897048 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 614 0.6560109406384889 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 578 0.6175477584512159 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 373 0.3985213043292448 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 349 0.37287918287106286 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 291 0.3109107226804564 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 197 0.21047908030257706 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 192 0.20513697166545578 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 189 0.20193170648318304 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 168 0.17949485020727382 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 164 0.1752211632975768 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 125 0.1335527159280311 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 124 0.13248429420060687 No Hit CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAA 118 0.12607376383606136 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 107 0.11432112483439465 No Hit GTTATAGCCTGTGGTGATGCGGCGCGTCTCGGGTGAGGTCCGCGCTTCGG 107 0.11432112483439465 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 106 0.11325270310697039 No Hit GGTTAAGGTTGTTTCAACCCCAAGGCCTCTAATCATTCGCTTTACCTCAT 96 0.10256848583272789 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0010684217274242488 0.0 22 0.0 0.0 0.0 0.0010684217274242488 0.0 23 0.0 0.0 0.0 0.005342108637121245 0.0 24 0.0 0.0 0.0 0.00854737381939399 0.0 25 0.0 0.0 0.0 0.00961579554681824 0.0 26 0.0 0.0 0.0 0.01068421727424249 0.0 27 0.0 0.0 0.0 0.012821060729090986 0.0 28 0.0 0.0 0.0 0.01709474763878798 0.0 29 0.0 0.0 0.0 0.02671054318560622 0.0 30 0.0 0.0 0.0 0.05555792982606094 0.0 31 0.0 0.0 0.0 0.08547373819393991 0.0 32 0.0 0.0 0.0 0.11538954656181888 0.0 33 0.0 0.0 0.0 0.13462113765545536 0.0 34 0.0 0.0 0.0 0.1591948373862131 0.0 35 0.0 0.0 0.0 0.18804222402666781 0.0 36 0.0 0.0 0.0 0.22543698448651653 0.0 37 0.0 0.0 0.0 0.2735159622206077 0.0 38 0.0 0.0 0.0 0.32693704859182016 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACATG 45 2.3121174E-8 39.11016 1 GTCTAGA 30 1.2921623E-4 36.665775 39 TGTCTAG 30 1.2921623E-4 36.665775 38 ACAGTGC 25 0.0023420283 35.199146 8 TTATAGC 25 0.0023420283 35.199146 4 TAGATGA 35 3.1958497E-4 31.427807 42 ACATGGT 30 0.0057189865 29.33262 10 TGGGTGG 55 4.898073E-6 27.99932 6 TCTAGAT 40 6.984414E-4 27.499332 40 GGCATAG 40 6.984414E-4 27.499332 6 ATAGTTC 40 6.984414E-4 27.499332 9 CTGTCTA 45 0.0013888024 24.44385 37 CATAGTT 45 0.0013888024 24.44385 8 AGGCATA 45 0.0013888024 24.44385 5 CTTCTAG 45 0.0013888024 24.44385 1 GCATAGT 45 0.0013888024 24.44385 7 TTCAGGC 55 1.5786094E-4 23.999416 2 ATATCAA 65 1.7906432E-5 23.691732 1 GAGTGAT 50 0.0025632093 21.999466 7 ACTTCCA 50 0.0025632093 21.999466 16 >>END_MODULE