##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061960_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2622952 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.236313893658746 32.0 32.0 32.0 32.0 32.0 2 30.746331995400602 32.0 32.0 32.0 32.0 32.0 3 30.77955219920151 32.0 32.0 32.0 32.0 32.0 4 30.791588637535114 32.0 32.0 32.0 32.0 32.0 5 30.695861380612378 32.0 32.0 32.0 32.0 32.0 6 34.3605517752517 36.0 36.0 36.0 32.0 36.0 7 34.29741642241261 36.0 36.0 36.0 32.0 36.0 8 34.246429976606514 36.0 36.0 36.0 32.0 36.0 9 34.38880886878601 36.0 36.0 36.0 32.0 36.0 10 34.05788516145168 36.0 36.0 36.0 32.0 36.0 11 34.36982491482879 36.0 36.0 36.0 32.0 36.0 12 34.1866862222412 36.0 36.0 36.0 32.0 36.0 13 34.283748234813295 36.0 36.0 36.0 32.0 36.0 14 34.1869611033675 36.0 36.0 36.0 32.0 36.0 15 34.124067081669814 36.0 36.0 36.0 32.0 36.0 16 34.135618570221645 36.0 36.0 36.0 32.0 36.0 17 34.066279138924386 36.0 36.0 36.0 32.0 36.0 18 34.06516817692432 36.0 36.0 36.0 32.0 36.0 19 34.07856186464716 36.0 36.0 36.0 32.0 36.0 20 34.06375869630859 36.0 36.0 36.0 32.0 36.0 21 34.04612512924369 36.0 36.0 36.0 32.0 36.0 22 34.017980504408776 36.0 36.0 36.0 32.0 36.0 23 33.98113232724045 36.0 36.0 36.0 32.0 36.0 24 33.95953833695775 36.0 36.0 36.0 32.0 36.0 25 33.598453193196065 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 35.0 5 196.0 6 556.0 7 125.0 8 468.0 9 340.0 10 193.0 11 65.0 12 114.0 13 115.0 14 339.0 15 533.0 16 810.0 17 1260.0 18 1750.0 19 2353.0 20 3737.0 21 5380.0 22 8050.0 23 11998.0 24 16904.0 25 23899.0 26 32197.0 27 40995.0 28 54294.0 29 70625.0 30 91428.0 31 123437.0 32 174186.0 33 244565.0 34 533692.0 35 1178308.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.78672965002678 16.8340567650877 11.434987409046805 25.944226175838715 2 17.055409091688922 18.889950037076645 37.25232515359643 26.802315717638 3 19.799857640282845 22.192408269673685 27.677069906093678 30.3306641839498 4 13.134442403696681 15.171254409139975 34.37602114175707 37.31828204540628 5 15.34682937377696 35.98687745823597 32.960088907432464 15.70620426055461 6 35.803844401903504 34.09627256447838 16.182066222962494 13.917816810655614 7 31.649305548929497 29.479143568231613 19.44119502604263 19.430355856796254 8 28.663290437745676 33.027655994104 18.44346152392882 19.8655920442215 9 26.97068304441344 14.63007884144491 18.155785809303328 40.243452304838314 10 16.727221223478193 26.377099191761783 30.473341042474978 26.42233854228505 11 37.53187505703053 21.150567861848472 21.510867203902244 19.80668987721875 12 24.820626176323497 23.1842909990494 28.1287628035535 23.86632002107361 13 29.769862856815642 19.17061299281358 24.713602656970252 26.34592149340052 14 23.745492590614816 19.15046378556354 24.493168128135434 32.61087549568621 15 25.522787323531244 26.889602969871035 21.491593598926155 26.09601610767157 16 26.216743093438648 25.57167390853752 23.081903059068548 25.129679938955285 17 24.49351974005668 25.873781515684552 24.443360329326687 25.189338414932084 18 25.170335724833805 25.0375480968697 25.22487827164631 24.56723790665018 19 25.88258056834418 24.83147508151477 24.623719271679263 24.662225078461784 20 26.072803857900023 24.246811573242134 24.406705150519386 25.273679418338457 21 26.736186636199687 24.00262999028445 24.152484486033803 25.108698887482056 22 26.32154630936415 24.029301289278102 24.41587099738725 25.233281403970498 23 24.942440843992365 24.14462553543179 24.952857582202565 25.96007603837328 24 25.018307567904003 24.617010258725337 24.869213940387734 25.495468232982933 25 25.204877996660286 24.35983734923208 24.716628049320306 25.71865660478733 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 358.0 1 358.0 2 550.0 3 742.0 4 742.0 5 742.0 6 1408.5 7 2075.0 8 2075.0 9 2075.0 10 2578.5 11 3082.0 12 3082.0 13 3082.0 14 4130.5 15 5179.0 16 5179.0 17 5179.0 18 8806.0 19 12433.0 20 12433.0 21 12433.0 22 20335.5 23 28238.0 24 28238.0 25 28238.0 26 42924.0 27 57610.0 28 57610.0 29 57610.0 30 74925.0 31 92240.0 32 92240.0 33 92240.0 34 118055.5 35 143871.0 36 143871.0 37 143871.0 38 173005.5 39 202140.0 40 202140.0 41 202140.0 42 235323.5 43 268507.0 44 268507.0 45 268507.0 46 303035.5 47 337564.0 48 337564.0 49 337564.0 50 353923.0 51 370282.0 52 370282.0 53 370282.0 54 351624.0 55 332966.0 56 332966.0 57 332966.0 58 309400.5 59 285835.0 60 285835.0 61 285835.0 62 249493.5 63 213152.0 64 213152.0 65 213152.0 66 173615.0 67 134078.0 68 134078.0 69 134078.0 70 101186.0 71 68294.0 72 68294.0 73 68294.0 74 50852.0 75 33410.0 76 33410.0 77 33410.0 78 25891.5 79 18373.0 80 18373.0 81 18373.0 82 12623.5 83 6874.0 84 6874.0 85 6874.0 86 5050.0 87 3226.0 88 3226.0 89 3226.0 90 2183.5 91 1141.0 92 1141.0 93 1141.0 94 710.0 95 279.0 96 279.0 97 279.0 98 641.0 99 1003.0 100 1003.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0014106243652190356 2 2.66874879906304E-4 3 7.243746740313966E-4 4 0.010484370282033374 5 0.03427435957653819 6 0.06427872107457552 7 0.10770307653361556 8 0.1093805757787409 9 0.11959807118086796 10 0.13538181407818367 11 0.14262556081849764 12 0.13580118888946502 13 0.1306543162055577 14 0.11814932183280519 15 0.13644931359780887 16 0.12325806953386871 17 0.1259649433157755 18 0.11357432389155425 19 0.09790495594276982 20 0.09374933281280023 21 0.0918812086534561 22 0.10392870323208356 23 0.08273121277095426 24 0.09344433295005017 25 0.09027995937401828 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2622952.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.17278160215675 #Duplication Level Percentage of deduplicated Percentage of total 1 73.30843195600308 36.04779514169108 2 14.80034045733486 14.555478178921835 3 5.079154571106972 7.492684753459178 4 2.23721293998807 4.400399331822094 5 1.1522361228515463 2.8329327611547472 6 0.753004309530479 2.221638987481505 7 0.4734667752416484 1.6297174834384507 8 0.34218748872611715 1.3461048520095866 9 0.25656865838276316 1.1354575144152579 >10 1.4174807284141189 12.805140393688792 >50 0.10101911147088904 3.40675404841254 >100 0.0669291051014262 6.543277534777295 >500 0.00808213433895975 2.690693205194949 >1k 0.0038856415091082304 2.891925813532667 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3363 0.1282143173035572 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2651 0.10106932951880172 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.812498284375772E-5 1.1437494853127317E-4 2 0.0 0.0 0.0 3.812498284375772E-5 1.1437494853127317E-4 3 0.0 0.0 0.0 3.812498284375772E-5 1.1437494853127317E-4 4 0.0 0.0 0.0 3.812498284375772E-5 1.1437494853127317E-4 5 0.0 0.0 0.0 3.812498284375772E-5 1.5249993137503087E-4 6 0.0 0.0 0.0 3.812498284375772E-5 1.9062491421878861E-4 7 0.0 0.0 0.0 3.812498284375772E-5 1.9062491421878861E-4 8 0.0 0.0 0.0 3.812498284375772E-5 1.9062491421878861E-4 9 0.0 0.0 0.0 7.624996568751543E-5 1.9062491421878861E-4 10 0.0 0.0 0.0 7.624996568751543E-5 1.9062491421878861E-4 11 0.0 0.0 0.0 1.1437494853127317E-4 1.9062491421878861E-4 12 0.0 0.0 0.0 1.1437494853127317E-4 5.33749759812608E-4 13 0.0 0.0 0.0 1.1437494853127317E-4 6.862496911876389E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1035 0.0 14.402333 1 ATTACGC 40 0.005283164 14.248868 3 CGAATTG 50 0.001499628 13.300468 14 GCGTTAT 210 0.0 12.659376 1 GTATCAA 2895 0.0 12.528191 1 ATACGCT 215 0.0 12.37371 8 ACGGTCC 70 1.0901202E-4 12.215881 8 TCGCGTA 245 0.0 12.022438 9 CGTTATT 225 0.0 11.818351 2 ACGAACG 130 2.6193447E-9 11.692273 15 GTCCTAA 310 0.0 11.638459 1 TACGCTA 230 0.0 11.567171 9 ATATACG 255 0.0 11.550529 6 CGCCGGT 350 0.0 11.401708 7 ACGGCGT 75 2.0723336E-4 11.401489 8 AGAGCGA 585 0.0 11.205094 15 TAAGGCG 60 0.0058759423 11.083723 5 ACGCTAT 250 0.0 11.02165 10 CGATAAC 130 3.2619937E-8 10.96318 10 CGAACGA 130 3.270361E-8 10.961296 16 >>END_MODULE