##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061958_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3262789 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.267051592977666 32.0 32.0 32.0 32.0 32.0 2 30.769065973925986 32.0 32.0 32.0 32.0 32.0 3 30.805873747888693 32.0 32.0 32.0 32.0 32.0 4 30.81614747383297 32.0 32.0 32.0 32.0 32.0 5 30.703449410918083 32.0 32.0 32.0 32.0 32.0 6 34.38336895214493 36.0 36.0 36.0 32.0 36.0 7 34.323632941020705 36.0 36.0 36.0 32.0 36.0 8 34.267714216273255 36.0 36.0 36.0 32.0 36.0 9 34.42969772179568 36.0 36.0 36.0 32.0 36.0 10 34.08895671770378 36.0 36.0 36.0 32.0 36.0 11 34.40768986287498 36.0 36.0 36.0 32.0 36.0 12 34.2174467916865 36.0 36.0 36.0 32.0 36.0 13 34.31253844487033 36.0 36.0 36.0 32.0 36.0 14 34.20519224503944 36.0 36.0 36.0 32.0 36.0 15 34.15329645894969 36.0 36.0 36.0 32.0 36.0 16 34.15546822059287 36.0 36.0 36.0 32.0 36.0 17 34.08879397349936 36.0 36.0 36.0 32.0 36.0 18 34.09498806082772 36.0 36.0 36.0 32.0 36.0 19 34.10020782833337 36.0 36.0 36.0 32.0 36.0 20 34.08930856393104 36.0 36.0 36.0 32.0 36.0 21 34.075224907280244 36.0 36.0 36.0 32.0 36.0 22 34.04050430475277 36.0 36.0 36.0 32.0 36.0 23 34.00309305934279 36.0 36.0 36.0 32.0 36.0 24 33.983543220232754 36.0 36.0 36.0 32.0 36.0 25 33.6260797127856 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 1.0 4 42.0 5 258.0 6 703.0 7 162.0 8 573.0 9 391.0 10 231.0 11 67.0 12 128.0 13 129.0 14 388.0 15 567.0 16 977.0 17 1296.0 18 1857.0 19 2628.0 20 4093.0 21 6128.0 22 9527.0 23 14024.0 24 20184.0 25 28310.0 26 39079.0 27 49735.0 28 65688.0 29 86391.0 30 114414.0 31 154541.0 32 219129.0 33 308660.0 34 673966.0 35 1458521.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.62290821267884 17.021693290343144 11.785880665448884 25.569517831529136 2 17.127540696815544 18.820449762871363 37.387741641652255 26.66426789866084 3 20.240452647035656 22.075584404996622 27.117936546417866 30.566026401549852 4 13.3117892236948 15.024119880310957 34.31588613969729 37.34820475629695 5 15.532196696784162 35.80003495142059 32.69702330401297 15.97074504778227 6 35.84107367335729 33.85115178160971 16.13947915360083 14.168295391432167 7 31.890102115358477 29.312566021538633 19.17015432203876 19.627177541064132 8 28.547106624059793 32.90727482200687 18.39871381650101 20.14690473743233 9 26.72652972052112 15.14728164580849 18.44882193707629 39.6773666965941 10 16.959665366473427 26.406525722036893 29.940248397263762 26.69356051422592 11 37.43125516957749 21.547489522733866 21.225813282917645 19.795442024771003 12 25.015482346442436 23.309846404075433 27.80841171686793 23.8662595326142 13 29.302756060519116 19.55022796089083 24.814732868256495 26.33228311033356 14 23.762996601744387 19.3040863448424 24.51101172896802 32.42190532444519 15 25.377976357622945 27.06241669789297 21.63797069238916 25.921636252094927 16 26.31433274980937 25.97603204727925 22.83334893147608 24.876286271435298 17 24.37890562188609 26.15958074902018 24.45482397620693 25.0066896528868 18 24.96147787501465 25.24044494818613 25.31380727462179 24.484269902177427 19 25.749488744400423 25.01293094720799 24.81511659940938 24.422463708982207 20 25.98869865850254 24.417830596449463 24.528942048414162 25.064528696633833 21 26.735212436771754 24.175651577987352 24.300842654664358 24.788293330576533 22 26.21115660934748 24.176284036623166 24.73714260644455 24.875416747584804 23 24.78518488072098 24.43636432791463 25.108362276462064 25.67008851490232 24 24.72864683257183 24.90396573504789 25.071707425115974 25.29568000726431 25 25.036121027990653 24.522849656152353 24.94489050803804 25.49613880781895 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 190.0 1 190.0 2 466.0 3 742.0 4 742.0 5 742.0 6 1550.0 7 2358.0 8 2358.0 9 2358.0 10 2902.0 11 3446.0 12 3446.0 13 3446.0 14 5010.0 15 6574.0 16 6574.0 17 6574.0 18 11407.0 19 16240.0 20 16240.0 21 16240.0 22 26307.5 23 36375.0 24 36375.0 25 36375.0 26 54891.0 27 73407.0 28 73407.0 29 73407.0 30 96455.0 31 119503.0 32 119503.0 33 119503.0 34 152297.5 35 185092.0 36 185092.0 37 185092.0 38 222633.5 39 260175.0 40 260175.0 41 260175.0 42 298747.5 43 337320.0 44 337320.0 45 337320.0 46 376011.5 47 414703.0 48 414703.0 49 414703.0 50 435785.5 51 456868.0 52 456868.0 53 456868.0 54 431144.5 55 405421.0 56 405421.0 57 405421.0 58 376122.0 59 346823.0 60 346823.0 61 346823.0 62 304060.5 63 261298.0 64 261298.0 65 261298.0 66 213955.0 67 166612.0 68 166612.0 69 166612.0 70 126237.0 71 85862.0 72 85862.0 73 85862.0 74 64845.0 75 43828.0 76 43828.0 77 43828.0 78 33852.5 79 23877.0 80 23877.0 81 23877.0 82 16522.5 83 9168.0 84 9168.0 85 9168.0 86 6620.5 87 4073.0 88 4073.0 89 4073.0 90 2684.5 91 1296.0 92 1296.0 93 1296.0 94 818.5 95 341.0 96 341.0 97 341.0 98 769.0 99 1197.0 100 1197.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.888101559739229E-4 2 9.194587820419893E-5 3 7.968642777697239E-4 4 0.010267289732802214 5 0.0342958125701662 6 0.06307487244808047 7 0.10530867916987584 8 0.10831224452454633 9 0.11631153592831164 10 0.13175844346661705 11 0.1392673568532933 12 0.12991952590253308 13 0.12614974489616093 14 0.11536142852020158 15 0.1323407673619103 16 0.11811980486632755 17 0.12336071992396688 18 0.11103997224460424 19 0.097064198757566 20 0.09191522957813085 21 0.09108771667429306 22 0.10181473579811628 23 0.08152534534105638 24 0.09240560759521992 25 0.0893407449884133 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3262789.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.83086790465423 #Duplication Level Percentage of deduplicated Percentage of total 1 62.47529619623475 23.010193815076686 2 16.18627726136109 11.923092793625973 3 7.511325776528807 8.299459423924704 4 4.120955430265373 6.071134603722859 5 2.4414049594836262 4.495953178225457 6 1.648906554617833 3.6438395700148756 7 1.124806946261772 2.899933123920338 8 0.7744030035953514 2.281754778431029 9 0.6017633103419913 1.9947118493765994 >10 2.8416301075206336 18.194659440625745 >50 0.16396391530382426 4.135503730334235 >100 0.09384101728677863 6.84621988053023 >500 0.009557116394980851 2.4715122089465376 >1k 0.005868404803386618 3.7320316032446623 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4192 0.12847904047733397 No Hit GCGCAAGACGGACCAGAGCGAAAGC 3705 0.11355315958218566 No Hit GGGTAGGCACACGCTGAGCCAGTCA 3611 0.11067218873178743 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.129725213613262E-5 2 0.0 0.0 0.0 0.0 6.129725213613262E-5 3 0.0 3.064862606806631E-5 0.0 0.0 6.129725213613262E-5 4 0.0 3.064862606806631E-5 0.0 0.0 6.129725213613262E-5 5 0.0 3.064862606806631E-5 0.0 0.0 9.194587820419893E-5 6 0.0 3.064862606806631E-5 0.0 0.0 9.194587820419893E-5 7 0.0 3.064862606806631E-5 0.0 3.064862606806631E-5 9.194587820419893E-5 8 0.0 3.064862606806631E-5 0.0 3.064862606806631E-5 9.194587820419893E-5 9 0.0 3.064862606806631E-5 0.0 6.129725213613262E-5 9.194587820419893E-5 10 3.064862606806631E-5 3.064862606806631E-5 0.0 6.129725213613262E-5 9.194587820419893E-5 11 3.064862606806631E-5 3.064862606806631E-5 0.0 6.129725213613262E-5 9.194587820419893E-5 12 3.064862606806631E-5 3.064862606806631E-5 0.0 6.129725213613262E-5 2.4518900854453047E-4 13 3.064862606806631E-5 6.129725213613262E-5 0.0 6.129725213613262E-5 3.677835128167957E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1435 0.0 14.426543 1 TCGTATA 50 0.0015022279 13.297572 2 GTATCAA 4115 0.0 12.831063 1 CAAGACG 760 0.0 12.37521 4 GCGTTAT 210 0.0 12.20962 1 ACGGTAT 480 0.0 11.876295 9 AAGACGG 785 0.0 11.7395935 5 TATACTG 270 0.0 11.611842 5 CGGTCCA 500 0.0 11.591087 10 CGTTATT 225 0.0 11.39792 2 CGTATAC 85 5.3325275E-5 11.175288 3 CGCAAGA 800 0.0 11.160462 2 TATACCG 60 0.005875247 11.084031 5 ACGGTGC 140 8.349161E-9 10.858327 8 CGAATTT 105 3.4693494E-6 10.85716 15 TAGGACG 115 8.823972E-7 10.739313 4 GTCTTAG 285 0.0 10.662593 1 CCGACCA 615 0.0 10.659699 9 TCGGCGT 215 0.0 10.604993 13 CGGACCA 850 0.0 10.507028 9 >>END_MODULE