##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061958_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3262789 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27815405777082 32.0 32.0 32.0 32.0 32.0 2 31.451854226552804 32.0 32.0 32.0 32.0 32.0 3 31.575796044427022 32.0 32.0 32.0 32.0 32.0 4 31.654155693181508 32.0 32.0 32.0 32.0 32.0 5 31.627399136137825 32.0 32.0 32.0 32.0 32.0 6 35.27927487802613 36.0 36.0 36.0 36.0 36.0 7 35.28428194406687 36.0 36.0 36.0 36.0 36.0 8 35.23253419084102 36.0 36.0 36.0 36.0 36.0 9 35.31862495552118 36.0 36.0 36.0 36.0 36.0 10 35.20519163206692 36.0 36.0 36.0 36.0 36.0 11 35.32095149272601 36.0 36.0 36.0 36.0 36.0 12 35.24689307215392 36.0 36.0 36.0 36.0 36.0 13 35.2827718862605 36.0 36.0 36.0 36.0 36.0 14 35.24095306193566 36.0 36.0 36.0 36.0 36.0 15 35.2186105200183 36.0 36.0 36.0 36.0 36.0 16 35.23305552397044 36.0 36.0 36.0 36.0 36.0 17 35.21060356645802 36.0 36.0 36.0 36.0 36.0 18 35.206872096234235 36.0 36.0 36.0 36.0 36.0 19 35.206502780290116 36.0 36.0 36.0 36.0 36.0 20 35.20595018556211 36.0 36.0 36.0 36.0 36.0 21 35.194669345765234 36.0 36.0 36.0 36.0 36.0 22 35.18349669561838 36.0 36.0 36.0 36.0 36.0 23 35.15310429206424 36.0 36.0 36.0 36.0 36.0 24 35.13941293782712 36.0 36.0 36.0 36.0 36.0 25 35.1219870485036 36.0 36.0 36.0 36.0 36.0 26 35.07836087469953 36.0 36.0 36.0 36.0 36.0 27 35.0624456561549 36.0 36.0 36.0 36.0 36.0 28 35.04722187061437 36.0 36.0 36.0 36.0 36.0 29 35.02813268035414 36.0 36.0 36.0 36.0 36.0 30 35.013798317942104 36.0 36.0 36.0 36.0 36.0 31 35.017102546318505 36.0 36.0 36.0 36.0 36.0 32 34.99276232695403 36.0 36.0 36.0 36.0 36.0 33 34.971285608723086 36.0 36.0 36.0 36.0 36.0 34 34.96352752200648 36.0 36.0 36.0 36.0 36.0 35 34.95096127883231 36.0 36.0 36.0 36.0 36.0 36 34.935182446673686 36.0 36.0 36.0 36.0 36.0 37 34.919640528394574 36.0 36.0 36.0 36.0 36.0 38 34.903449472215335 36.0 36.0 36.0 36.0 36.0 39 34.888195038048735 36.0 36.0 36.0 32.0 36.0 40 34.8760931215595 36.0 36.0 36.0 32.0 36.0 41 34.85411560477861 36.0 36.0 36.0 32.0 36.0 42 34.830428507635645 36.0 36.0 36.0 32.0 36.0 43 34.82155235904007 36.0 36.0 36.0 32.0 36.0 44 34.78645631084327 36.0 36.0 36.0 32.0 36.0 45 34.76873006498428 36.0 36.0 36.0 32.0 36.0 46 34.75247863101169 36.0 36.0 36.0 32.0 36.0 47 34.73168231227947 36.0 36.0 36.0 32.0 36.0 48 34.702634463950936 36.0 36.0 36.0 32.0 36.0 49 34.700431747195424 36.0 36.0 36.0 32.0 36.0 50 34.28918909558663 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 26.0 21 74.0 22 229.0 23 606.0 24 1483.0 25 3541.0 26 7417.0 27 14097.0 28 24435.0 29 38675.0 30 57897.0 31 85229.0 32 130317.0 33 223458.0 34 517763.0 35 2157538.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.21931052793425 17.552709266572503 12.193562094519047 26.0344181109742 2 16.541578074805503 19.2587799808804 37.111604443176205 27.08803750113789 3 19.656127491319516 22.453436165918685 27.43553884587341 30.45489749688839 4 13.056686490204083 15.360758958289658 34.4192757850035 37.163278766502756 5 15.226298727867476 36.142637479775736 32.560977740209374 16.07008605214741 6 36.082406926109726 33.88581652968753 15.979666444361627 14.052110099841117 7 31.903687305553625 29.27716134877248 19.190637212519718 19.62851413315418 8 28.60794859857625 32.91745191000705 18.311971751774326 20.162627739642375 9 26.781688917058382 14.959257248936417 18.338789299583883 39.92026453442132 10 16.87327946117214 26.411232609187362 30.040431704684277 26.67505622495622 11 37.656403769903605 21.355288374455107 21.22257982358038 19.765728032060913 12 25.037421983898433 23.16678251850871 27.863471362527996 23.93232413506486 13 29.49029189444981 19.30667291081342 24.89180268782321 26.311232506913562 14 23.865778632942554 19.125846017011828 24.490612172592222 32.5177631774534 15 25.41779440840336 27.01087934279538 21.589259985858725 25.98206626294253 16 26.40324656358257 25.865084699425918 22.847038393415662 24.884630343575846 17 24.52549030905768 26.030797578390757 24.43213459405435 25.011577518497212 18 25.128149803404025 25.08993089641573 25.271616285851678 24.510303014328567 19 25.858061921871133 24.83298797439859 24.810767720499243 24.498182383231036 20 26.189958811210435 24.18951808288696 24.55092756761793 25.069595538284673 21 26.787436630095684 24.049685131147083 24.357274930910293 24.80560330784694 22 26.253950224792348 24.059355355188462 24.79783400029852 24.888860419720675 23 24.84026692517777 24.317983368206384 25.13556661835419 25.706183088261657 24 24.85534463972931 24.716811406311535 25.101271777991297 25.326572175967854 25 25.181823364233345 24.28773972640526 25.032441640293467 25.49799526906793 26 24.923508269504662 25.130019851224617 25.095693200656743 24.850778678613974 27 25.263985734824786 24.6499677727919 24.976745226680023 25.109301265703294 28 25.154341278503296 24.46908837580228 25.114252236695755 25.26231810899867 29 24.799150660068182 24.721118779784902 25.269609953999193 25.210120606147722 30 24.926166350981077 24.86134353334927 25.291718003886306 24.92077211178335 31 25.458237236708015 24.590754802277203 24.627441365095663 25.323566595919118 32 25.422364160458997 24.58776528496536 24.475283999920315 25.514586554655335 33 24.851982142846197 24.538507322891938 24.933415717016953 25.676094817244916 34 25.460163125897246 24.70377803304936 24.932480393875604 24.903578447177786 35 25.67482248288578 24.386505511857358 25.1610587767992 24.77761322845766 36 24.776731463248307 24.89944908858257 24.899816873673483 25.424002574495635 37 25.665638489462207 24.532814831251848 24.89232949564966 24.90921718363629 38 25.055198192466076 24.289595278639002 25.059918082327137 25.595288446567782 39 25.688999605856853 24.46620575007647 24.53957889820135 25.30521574586533 40 25.65903055212035 24.594510517855145 24.76277168124777 24.983687248776736 41 24.761597397048753 25.19647488413177 25.257987261084025 24.783940457735447 42 25.98555086300353 24.798804150165342 24.73036216019226 24.48528282663886 43 25.477356777641763 24.138600047691234 24.911406480736233 25.472636693930767 44 24.90141449435275 24.802997563330422 24.708442523715384 25.58714541860144 45 25.211004799060415 24.880728422464433 24.712647905644427 25.19561887283072 46 25.116252697136133 24.703621518242446 24.732431836014122 25.4476939486073 47 25.09970868177353 24.68962579170057 25.075158876470958 25.13550665005494 48 25.596199184225917 25.02927052338761 24.22532724751645 25.149203044870028 49 25.085849669596772 25.020473966187307 24.481224024421643 25.412452339794278 50 25.229930009574797 25.084040000833657 24.468635487070344 25.217394502521202 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 43.5 2 47.0 3 155.5 4 264.0 5 295.5 6 327.0 7 286.0 8 245.0 9 341.5 10 438.0 11 709.0 12 980.0 13 1750.0 14 2520.0 15 3331.5 16 4143.0 17 4057.5 18 3972.0 19 4002.5 20 4033.0 21 4750.5 22 5468.0 23 7048.5 24 8629.0 25 11398.5 26 14168.0 27 18321.5 28 22475.0 29 27139.0 30 31803.0 31 38318.0 32 44833.0 33 53202.5 34 61572.0 35 73148.0 36 84724.0 37 98078.0 38 111432.0 39 124357.5 40 137283.0 41 149768.0 42 162253.0 43 170841.0 44 179429.0 45 195755.5 46 212082.0 47 225542.5 48 239003.0 49 248094.0 50 257185.0 51 253909.0 52 250633.0 53 252432.5 54 254232.0 55 253153.5 56 252075.0 57 240588.5 58 229102.0 59 213607.0 60 198112.0 61 175801.5 62 153491.0 63 130948.5 64 108406.0 65 91478.0 66 74550.0 67 64864.5 68 55179.0 69 47709.0 70 40239.0 71 30662.0 72 21085.0 73 18325.0 74 15565.0 75 11482.0 76 7399.0 77 6244.0 78 5089.0 79 4365.5 80 3642.0 81 2849.0 82 2056.0 83 1676.0 84 1296.0 85 1042.5 86 789.0 87 529.0 88 269.0 89 173.5 90 78.0 91 62.5 92 47.0 93 39.0 94 31.0 95 32.0 96 33.0 97 32.0 98 31.0 99 21.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03297792164923934 2 0.00514896917943514 3 3.064862606806631E-4 4 3.064862606806631E-5 5 0.0 6 1.5324313034033156E-4 7 0.0 8 0.0 9 0.0 10 9.194587820419893E-5 11 0.0 12 3.064862606806631E-5 13 0.0 14 0.0 15 0.0 16 4.903780170890609E-4 17 0.0 18 1.8389175640839785E-4 19 0.0 20 2.4518900854453047E-4 21 6.129725213613262E-5 22 0.0 23 6.129725213613262E-5 24 0.0010420532863142545 25 2.1454038247646414E-4 26 5.516752692251935E-4 27 5.516752692251935E-4 28 0.0015937285555394478 29 6.129725213613262E-4 30 0.001501782677335249 31 4.290807649529283E-4 32 7.355670256335914E-4 33 2.1454038247646414E-4 34 0.001011404660246188 35 1.5324313034033156E-4 36 4.290807649529283E-4 37 0.0017469716858797796 38 3.064862606806631E-5 39 4.597293910209946E-4 40 1.2259450427226523E-4 41 9.501074081100556E-4 42 0.005271563683707405 43 0.004137564519188951 44 0.004260159023461217 45 0.0020534579465604427 46 0.002114755198696575 47 0.0010420532863142545 48 0.0037084837542360233 49 0.0033407002414192273 50 0.0017469716858797796 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3262789.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.16523149769515 #Duplication Level Percentage of deduplicated Percentage of total 1 61.29408168701321 22.780087353364834 2 16.73047683503884 12.435840892820892 3 7.743668235257717 8.633856678141047 4 4.204666247886541 6.250695778929943 5 2.6320024307393433 4.8909489820462015 6 1.6766576534468742 3.738802189964125 7 1.1275311616863561 2.9333469651456996 8 0.8283388651195902 2.4628324544566125 9 0.6102238179727205 2.041119851432719 >10 2.9038289582595374 18.60101190314564 >50 0.15003848285364668 3.813961471449047 >100 0.08465113994741787 6.045304853331595 >500 0.008946852432197535 2.2922381153450266 >1k 0.004887632346135631 3.0799525104266596 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3807 0.11667931944112843 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 3723 0.11410483485141086 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.129725213613262E-5 2 0.0 0.0 0.0 0.0 6.129725213613262E-5 3 0.0 0.0 0.0 0.0 6.129725213613262E-5 4 0.0 0.0 0.0 0.0 6.129725213613262E-5 5 0.0 3.064862606806631E-5 0.0 0.0 6.129725213613262E-5 6 0.0 3.064862606806631E-5 0.0 0.0 6.129725213613262E-5 7 0.0 3.064862606806631E-5 0.0 0.0 6.129725213613262E-5 8 0.0 3.064862606806631E-5 0.0 0.0 6.129725213613262E-5 9 0.0 3.064862606806631E-5 0.0 3.064862606806631E-5 6.129725213613262E-5 10 0.0 3.064862606806631E-5 0.0 3.064862606806631E-5 6.129725213613262E-5 11 0.0 3.064862606806631E-5 0.0 3.064862606806631E-5 9.194587820419893E-5 12 0.0 3.064862606806631E-5 0.0 3.064862606806631E-5 2.4518900854453047E-4 13 0.0 3.064862606806631E-5 0.0 6.129725213613262E-5 3.0648626068066306E-4 14 0.0 3.064862606806631E-5 0.0 9.194587820419893E-5 3.0648626068066306E-4 15 0.0 3.064862606806631E-5 0.0 3.0648626068066306E-4 3.98432138884862E-4 16 0.0 3.064862606806631E-5 0.0 4.5972939102099464E-4 4.290807649529283E-4 17 0.0 3.064862606806631E-5 0.0 6.129725213613261E-4 4.290807649529283E-4 18 0.0 3.064862606806631E-5 0.0 7.96864277769724E-4 4.903780170890609E-4 19 0.0 3.064862606806631E-5 0.0 9.194587820419893E-4 4.903780170890609E-4 20 0.0 3.064862606806631E-5 0.0 0.0014098367991310502 5.210266431571272E-4 21 0.0 3.064862606806631E-5 0.0 0.0018695661901520447 5.516752692251935E-4 22 0.0 3.064862606806631E-5 0.0 0.002390592833309172 5.823238952932598E-4 23 0.0 3.064862606806631E-5 0.0 0.0030648626068066308 5.823238952932598E-4 24 0.0 9.194587820419893E-5 0.0 0.004045618640984752 6.129725213613261E-4 25 0.0 9.194587820419893E-5 0.0 0.0050263746751628745 6.129725213613261E-4 26 0.0 9.194587820419893E-5 0.0 0.0057312930747284 6.742697734974588E-4 27 0.0 9.194587820419893E-5 0.0 0.007110481247791383 6.742697734974588E-4 28 0.0 9.194587820419893E-5 0.0 0.008029940029833373 6.742697734974588E-4 29 0.0 9.194587820419893E-5 0.0 0.010359235611006412 6.742697734974588E-4 30 0.0 9.194587820419893E-5 0.0 0.012412693557566854 7.049183995655251E-4 31 0.0 9.194587820419893E-5 0.0 0.015446907538305419 7.049183995655251E-4 32 0.0 9.194587820419893E-5 0.0 0.020105498700651498 7.662156517016577E-4 33 0.0 9.194587820419893E-5 0.0 0.02439630635018078 7.662156517016577E-4 34 0.0 1.5324313034033153E-4 0.0 0.02930008652107139 7.96864277769724E-4 35 0.0 1.5324313034033153E-4 0.0 0.03484748783939139 7.96864277769724E-4 36 0.0 1.5324313034033153E-4 0.0 0.042478995730339905 7.96864277769724E-4 37 0.0 1.5324313034033153E-4 0.0 0.05473844615756643 7.96864277769724E-4 38 0.0 1.5324313034033153E-4 0.0 0.06880616552280885 7.96864277769724E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3680 0.0 29.006447 1 GGTATCA 1420 0.0 28.518724 1 CGCAATA 565 0.0 19.08015 36 TCAACGC 5710 0.0 18.37708 4 ATCAACG 5755 0.0 18.309835 3 CTAGCGG 590 0.0 18.27083 29 ATACGAA 620 0.0 18.098919 40 TATCAAC 5895 0.0 18.062412 2 CAACGCA 5870 0.0 17.913649 5 CGAATGC 620 0.0 17.743765 43 TACGAAT 635 0.0 17.325151 41 AACGCAG 6110 0.0 17.173998 6 GTATAGG 480 0.0 16.965282 1 TATAGGG 330 0.0 16.666342 2 TCTAGCG 650 0.0 16.5848 28 TAGCGGC 665 0.0 16.54103 30 GCGCAAT 660 0.0 16.332514 35 CAATACG 675 0.0 15.972262 38 CGTCGTA 900 0.0 15.887849 10 ACCGTCG 950 0.0 15.746339 8 >>END_MODULE