##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061954_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1366335 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.230433971171053 32.0 32.0 32.0 32.0 32.0 2 30.908048172666295 32.0 32.0 32.0 32.0 32.0 3 30.93078930130605 32.0 32.0 32.0 32.0 32.0 4 30.91729041560086 32.0 32.0 32.0 32.0 32.0 5 30.899443401508414 32.0 32.0 32.0 32.0 32.0 6 34.53257290488789 36.0 36.0 36.0 32.0 36.0 7 34.44688088938657 36.0 36.0 36.0 32.0 36.0 8 34.41006634536918 36.0 36.0 36.0 32.0 36.0 9 34.484629318578534 36.0 36.0 36.0 32.0 36.0 10 34.29047195599908 36.0 36.0 36.0 32.0 36.0 11 34.51247754028112 36.0 36.0 36.0 32.0 36.0 12 34.39819663552496 36.0 36.0 36.0 32.0 36.0 13 34.41977626277597 36.0 36.0 36.0 32.0 36.0 14 34.35670168736071 36.0 36.0 36.0 32.0 36.0 15 34.32609718700026 36.0 36.0 36.0 32.0 36.0 16 34.3279847182426 36.0 36.0 36.0 32.0 36.0 17 34.27968104454617 36.0 36.0 36.0 32.0 36.0 18 34.27330266735464 36.0 36.0 36.0 32.0 36.0 19 34.247704259936256 36.0 36.0 36.0 32.0 36.0 20 34.2020836764044 36.0 36.0 36.0 32.0 36.0 21 34.18614102690775 36.0 36.0 36.0 32.0 36.0 22 34.1788390109307 36.0 36.0 36.0 32.0 36.0 23 34.152137652918206 36.0 36.0 36.0 32.0 36.0 24 34.11660903072819 36.0 36.0 36.0 32.0 36.0 25 33.80299487314604 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 29.0 5 94.0 6 295.0 7 59.0 8 234.0 9 203.0 10 93.0 11 28.0 12 60.0 13 77.0 14 316.0 15 471.0 16 692.0 17 872.0 18 1174.0 19 1731.0 20 2326.0 21 3090.0 22 4203.0 23 5639.0 24 7765.0 25 10460.0 26 14068.0 27 17762.0 28 23517.0 29 31149.0 30 40635.0 31 56559.0 32 80742.0 33 117510.0 34 275304.0 35 669175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.643752401515016 19.274477155874333 12.451503119682359 22.630267322928294 2 15.926656186051414 20.444079477023152 39.712236850194536 23.917027486730895 3 18.415497957289716 26.758406876270747 28.532512833724404 26.293582332715125 4 11.640057502730208 15.955470518139418 36.640643070247606 35.763828908882765 5 13.706209229282434 38.61948794541208 31.637125055825226 16.037177769480255 6 30.575003735026936 37.84409851096926 17.878914820879828 13.701982933123977 7 29.08105359488809 33.0992597520686 19.70870734672076 18.110979306322548 8 29.24201903561668 31.945765344626725 18.673588265033228 20.13862735472337 9 28.224311940387096 14.305938940594473 19.774509753632927 37.695239365385504 10 17.087946598380448 27.7293538143124 28.96926460640271 26.213434980904438 11 35.596295039407536 24.241076042285865 20.545790507156244 19.616838411150354 12 24.47102918262557 26.476537661549553 28.412933638806194 20.639499517018677 13 28.533937792317627 22.57992885441538 25.8170969259655 23.069036427301494 14 23.42438591169087 20.839726651747704 26.430381342208502 29.305506094352925 15 25.87430576626255 27.276478356910527 23.209063845318347 23.640152031508574 16 24.971567926275924 28.778388106599756 23.314740124983878 22.935303842140435 17 21.80838473426992 27.731736576093052 25.328832865918855 25.13104582371818 18 22.09493774303955 28.125432772521208 27.00361312389769 22.77601636054155 19 25.000586099478667 25.365213237642827 27.240658306934435 22.393542355944074 20 26.803463634765283 24.855974916485966 25.752651936939575 22.58790951180918 21 27.86893172232971 24.056411988316732 25.427957940820306 22.646698348533253 22 25.94387349519848 25.35547055017983 26.19576358671562 22.504892367906066 23 24.483045049611558 25.989191374781534 26.184473258980695 23.34329031662621 24 23.93425617703596 25.90142821979465 26.42587556847485 23.73844003469455 25 24.041924918706005 25.97100447071182 26.02748355989677 23.959587050685403 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 229.0 1 229.0 2 527.5 3 826.0 4 826.0 5 826.0 6 1781.0 7 2736.0 8 2736.0 9 2736.0 10 2937.0 11 3138.0 12 3138.0 13 3138.0 14 3563.0 15 3988.0 16 3988.0 17 3988.0 18 6660.5 19 9333.0 20 9333.0 21 9333.0 22 14674.5 23 20016.0 24 20016.0 25 20016.0 26 32293.5 27 44571.0 28 44571.0 29 44571.0 30 57854.0 31 71137.0 32 71137.0 33 71137.0 34 84355.0 35 97573.0 36 97573.0 37 97573.0 38 114227.5 39 130882.0 40 130882.0 41 130882.0 42 145288.5 43 159695.0 44 159695.0 45 159695.0 46 178224.0 47 196753.0 48 196753.0 49 196753.0 50 198401.5 51 200050.0 52 200050.0 53 200050.0 54 177777.5 55 155505.0 56 155505.0 57 155505.0 58 130411.0 59 105317.0 60 105317.0 61 105317.0 62 88065.0 63 70813.0 64 70813.0 65 70813.0 66 57483.0 67 44153.0 68 44153.0 69 44153.0 70 35018.5 71 25884.0 72 25884.0 73 25884.0 74 19799.5 75 13715.0 76 13715.0 77 13715.0 78 9716.0 79 5717.0 80 5717.0 81 5717.0 82 3974.0 83 2231.0 84 2231.0 85 2231.0 86 1636.5 87 1042.0 88 1042.0 89 1042.0 90 711.0 91 380.0 92 380.0 93 380.0 94 261.0 95 142.0 96 142.0 97 142.0 98 325.5 99 509.0 100 509.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 7.318849330508258E-4 2 2.1956547991524775E-4 3 9.514504129660735E-4 4 0.010173200569406477 5 0.0340326493868634 6 0.06462543958838791 7 0.11139288681033567 8 0.11161245229025094 9 0.12178565285965741 10 0.1377407444001654 11 0.1465233635967753 12 0.1385458178265213 13 0.13239798438889439 14 0.11922405559397951 15 0.13766755590686033 16 0.12288348025923364 17 0.12705522437762334 18 0.11622332736847113 19 0.10092693226770888 20 0.09477909883008194 21 0.09558417225643785 22 0.10641606926559007 23 0.08262980894143823 24 0.09360808293720062 25 0.0898754697786414 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1366335.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.347170756858542 #Duplication Level Percentage of deduplicated Percentage of total 1 59.92764125925042 17.587067210909833 2 14.187545481550664 8.327286397355284 3 7.279138239700014 6.408663386497651 4 4.386948976975172 5.149781629156651 5 2.9208500364911574 4.285934238804125 6 2.1275062769243798 3.7461773997112897 7 1.5481764438994479 3.180421892260419 8 1.1750539756736667 2.7587607738096476 9 0.9257441096227624 2.4451173416029666 >10 5.058798851356225 26.079674183080364 >50 0.27458944251000916 5.494928841410229 >100 0.17000624677061285 9.184754225040436 >500 0.013250485300049306 2.6993048926126018 >1k 0.004500164818884669 2.1634792978653925 >5k 2.500091566047039E-4 0.4886482898831185 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6660 0.48743536541184995 No Hit TATCAACGCAGAGTACTTTTTTTTT 3955 0.28946049102160154 No Hit GTATCAACGCAGAGTACATGGGCAG 2855 0.20895314838601073 No Hit GGTATCAACGCAGAGTACTTTTTTT 2726 0.1995118327496551 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1899 0.13898494878635181 No Hit ATGTAGATAAGGGAAGTCGGCAAAA 1658 0.1213465218998269 No Hit TATCAACGCAGAGTACATGGGCAGA 1646 0.12046825998016591 No Hit ACGCAGAGTACATGGGCAGAAATCA 1525 0.11161245229025094 No Hit GGTATCAACGCAGAGTACATGGGGG 1471 0.10766027365177647 No Hit GGTATCAACGCAGAGTACATGGGCA 1406 0.1029030215869461 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 7.318849330508258E-5 0.0 6 0.0 0.0 0.0 7.318849330508258E-5 0.0 7 7.318849330508258E-5 0.0 0.0 7.318849330508258E-5 0.0 8 7.318849330508258E-5 0.0 0.0 7.318849330508258E-5 0.0 9 7.318849330508258E-5 0.0 0.0 1.4637698661016516E-4 0.0 10 7.318849330508258E-5 0.0 0.0 2.1956547991524772E-4 0.0 11 7.318849330508258E-5 0.0 0.0 2.1956547991524772E-4 0.0 12 7.318849330508258E-5 0.0 0.0 2.927539732203303E-4 0.0 13 7.318849330508258E-5 0.0 0.0 2.927539732203303E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1745 0.0 16.107838 1 GCCGCAT 60 2.561133E-5 14.253933 11 GGCGAAT 40 0.005272857 14.252364 12 CTATACT 50 0.0014995793 13.299769 4 GTATCAA 5500 0.0 12.741914 1 GTGATCG 85 3.9366187E-6 12.295708 9 TCGGATG 85 3.9366187E-6 12.295708 13 TAGGGTC 240 0.0 12.270619 4 CTATGCA 70 1.089396E-4 12.215865 9 CGTCTTA 210 0.0 12.214969 15 TCTCGTC 215 0.0 11.932213 12 TATGCGA 65 8.0037693E-4 11.695534 11 ATAGACC 65 8.0333644E-4 11.69039 3 GCGCTAT 115 7.042581E-8 11.568409 11 TGCGCTA 115 7.049857E-8 11.567561 10 CGACAAG 100 1.9275194E-6 11.400639 15 TCCTCGG 85 5.310547E-5 11.178736 10 TTCTCGT 230 0.0 11.1552515 11 CCTTTAA 265 0.0 11.108535 1 CGAAATT 60 0.005869384 11.084765 13 >>END_MODULE