##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061954_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1366335 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.254467608602575 32.0 32.0 32.0 32.0 32.0 2 31.50992106620997 32.0 32.0 32.0 32.0 32.0 3 31.61123882503193 32.0 32.0 32.0 32.0 32.0 4 31.68251270735215 32.0 32.0 32.0 32.0 32.0 5 31.664706678815957 32.0 32.0 32.0 32.0 32.0 6 35.310109160637765 36.0 36.0 36.0 36.0 36.0 7 35.307679302660034 36.0 36.0 36.0 36.0 36.0 8 35.26993746043247 36.0 36.0 36.0 36.0 36.0 9 35.33801593313499 36.0 36.0 36.0 36.0 36.0 10 35.24557374289614 36.0 36.0 36.0 36.0 36.0 11 35.35168022483505 36.0 36.0 36.0 36.0 36.0 12 35.2936036916276 36.0 36.0 36.0 36.0 36.0 13 35.3055195102226 36.0 36.0 36.0 36.0 36.0 14 35.27671471491252 36.0 36.0 36.0 36.0 36.0 15 35.25264667888914 36.0 36.0 36.0 36.0 36.0 16 35.26515825181965 36.0 36.0 36.0 36.0 36.0 17 35.248603746518974 36.0 36.0 36.0 36.0 36.0 18 35.243527392623335 36.0 36.0 36.0 36.0 36.0 19 35.21400681384873 36.0 36.0 36.0 36.0 36.0 20 35.20115345065449 36.0 36.0 36.0 36.0 36.0 21 35.186103700776165 36.0 36.0 36.0 36.0 36.0 22 35.1857545916631 36.0 36.0 36.0 36.0 36.0 23 35.151290862050665 36.0 36.0 36.0 36.0 36.0 24 35.12559804147592 36.0 36.0 36.0 36.0 36.0 25 35.109926921289436 36.0 36.0 36.0 36.0 36.0 26 35.06493209937533 36.0 36.0 36.0 36.0 36.0 27 35.04709313601715 36.0 36.0 36.0 36.0 36.0 28 35.025504726146956 36.0 36.0 36.0 36.0 36.0 29 34.98004735295517 36.0 36.0 36.0 36.0 36.0 30 34.96915690515137 36.0 36.0 36.0 36.0 36.0 31 34.946148638511055 36.0 36.0 36.0 36.0 36.0 32 34.93725330903475 36.0 36.0 36.0 36.0 36.0 33 34.901780310099646 36.0 36.0 36.0 36.0 36.0 34 34.86396088806918 36.0 36.0 36.0 32.0 36.0 35 34.84133393347898 36.0 36.0 36.0 32.0 36.0 36 34.81205048542268 36.0 36.0 36.0 32.0 36.0 37 34.79763454789638 36.0 36.0 36.0 32.0 36.0 38 34.78180021736983 36.0 36.0 36.0 32.0 36.0 39 34.7189210552317 36.0 36.0 36.0 32.0 36.0 40 34.72618135376756 36.0 36.0 36.0 32.0 36.0 41 34.662590067589576 36.0 36.0 36.0 32.0 36.0 42 34.66551394789711 36.0 36.0 36.0 32.0 36.0 43 34.61794069536388 36.0 36.0 36.0 32.0 36.0 44 34.52907522679284 36.0 36.0 36.0 32.0 36.0 45 34.50325798577948 36.0 36.0 36.0 32.0 36.0 46 34.45155031525943 36.0 36.0 36.0 32.0 36.0 47 34.42632077784731 36.0 36.0 36.0 32.0 36.0 48 34.39037498124545 36.0 36.0 36.0 32.0 36.0 49 34.30809281764721 36.0 36.0 36.0 32.0 36.0 50 33.945842710609035 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 15.0 21 46.0 22 139.0 23 379.0 24 874.0 25 2050.0 26 4163.0 27 7435.0 28 12279.0 29 18935.0 30 27464.0 31 39626.0 32 58830.0 33 94448.0 34 203933.0 35 895714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.25355181335391 19.891545783727036 12.891658528085792 22.963243874833264 2 15.484731332643372 20.829753004914135 39.344283892840465 24.34123176960202 3 17.956342744222642 26.917021938411434 28.832159259327028 26.294476058038903 4 11.396627764514387 16.26725237021109 36.69805479480127 35.63806507047325 5 13.362106190726426 38.89451627493717 31.575515210775695 16.167862323560712 6 30.824741588970756 37.92719333748557 17.643528544693783 13.604536528849891 7 29.085839124372864 33.023672818159525 19.768065664716193 18.12242239275141 8 29.29442633029235 32.04594773609693 18.664383185675547 19.99524274793517 9 28.330387496477805 14.064998700904244 19.72437213421306 37.8802416684049 10 17.0095306125735 27.824675372200353 29.106572770640266 26.059221244585878 11 35.80798266896478 24.00304464132149 20.66740587044905 19.521566819264674 12 24.578672141165967 26.353200349841 28.37488610040729 20.69324140858574 13 28.667127754174487 22.414488394134676 25.988136145235245 22.930247706455592 14 23.594799225665742 20.572187640659134 26.46730121090362 29.365711922771503 15 26.000797754577025 27.213677465628855 23.118561699729568 23.66696308006455 16 25.10621511185796 28.509124070228957 23.43802490026209 22.946635917650994 17 21.912708084035028 27.57398441816978 25.489429751854413 25.02387774594078 18 22.246041045630896 27.955264199869283 27.080660424654894 22.718034329844922 19 25.125316997661628 25.217607687719333 27.36166459909173 22.295410715527307 20 26.914001490127536 24.745119393175568 25.801089930221632 22.53978918647526 21 28.089178780590984 23.83348434570171 25.32997056356645 22.74736631014086 22 25.99457673264609 25.27096209933874 26.284329977640912 22.45013119037425 23 24.465778108264967 25.836015085634322 26.336112792415907 23.362094013684803 24 24.118434920077288 25.91559810293343 26.37142104338662 23.59454593360267 25 24.29138745195165 25.6893639320458 26.135009646264596 23.884238969737957 26 23.950035569685845 26.022518685063368 26.677483949728177 23.34996179552261 27 23.700493147316234 26.40555767803584 26.470110354337105 23.42383882031082 28 23.036764555198065 26.546128421243694 26.723027469487292 23.694079554070946 29 23.66756200917787 25.718018341103537 26.478230003000743 24.136189646717852 30 23.76092259567495 26.265828111883096 26.807209736525657 23.1660395559163 31 24.61989305626915 26.043565005716058 25.641903908730416 23.694638029284373 32 23.1984846910172 25.877940924613668 26.53122763155391 24.39234675281522 33 23.428036942677956 25.953921920937283 27.19673754494695 23.421303591437812 34 23.394153638971837 25.48326892675215 27.646012647110485 23.476564787165525 35 23.98886067055543 25.85305160539548 26.303967562741065 23.85412016130803 36 24.220979966801625 25.864577569726833 26.093438490791403 23.82100397268014 37 24.03332769772036 25.329665061614815 26.002132750157177 24.634874490507652 38 23.417902637347357 26.257689366077862 26.716434842114122 23.607973154460655 39 24.076520481553832 24.99467550593672 27.00898101259801 23.919822999911442 40 24.020756256701322 25.53934430428848 26.711677590049295 23.728221848960906 41 24.460741261197963 26.489621757714154 26.035116224603318 23.014520756484572 42 23.669936154593277 26.668467190575207 26.25771352493543 23.403883129896087 43 23.652872987781404 26.285426538376523 26.30570059680387 23.7559998770382 44 23.663004145587408 25.71654838860783 26.591044828555365 24.02940263724939 45 24.407345331586537 25.738887953685474 26.066485643814364 23.78728107091363 46 24.778800571762737 26.299841689349563 25.117671728264856 23.803686010622844 47 23.7472919960185 26.005547748697232 26.408235259675628 23.838924995608643 48 23.542000756803365 26.659679288107135 25.918026631573632 23.880293323515872 49 24.116728293678328 25.82047363505684 26.08842671069851 23.974371360566323 50 23.831194970394712 26.522311920428017 25.75111065570771 23.895382453469562 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 49.0 1 63.0 2 77.0 3 185.5 4 294.0 5 346.5 6 399.0 7 383.0 8 367.0 9 532.0 10 697.0 11 1015.0 12 1333.0 13 2473.5 14 3614.0 15 4809.0 16 6004.0 17 5851.5 18 5699.0 19 5469.0 20 5239.0 21 5320.0 22 5401.0 23 5520.0 24 5639.0 25 6732.5 26 7826.0 27 10252.5 28 12679.0 29 15300.0 30 17921.0 31 20524.0 32 23127.0 33 29083.5 34 35040.0 35 41030.0 36 47020.0 37 55937.0 38 64854.0 39 73326.0 40 81798.0 41 87142.0 42 92486.0 43 94843.0 44 97200.0 45 98826.5 46 100453.0 47 103196.5 48 105940.0 49 106812.5 50 107685.0 51 105193.0 52 102701.0 53 97685.5 54 92670.0 55 87311.5 56 81953.0 57 75049.5 58 68146.0 59 60439.5 60 52733.0 61 45492.0 62 38251.0 63 33611.0 64 28971.0 65 25424.5 66 21878.0 67 18983.0 68 16088.0 69 14014.5 70 11941.0 71 9894.5 72 7848.0 73 6922.5 74 5997.0 75 4643.0 76 3289.0 77 2740.5 78 2192.0 79 1753.0 80 1314.0 81 978.0 82 642.0 83 514.5 84 387.0 85 299.0 86 211.0 87 161.0 88 111.0 89 89.5 90 68.0 91 57.0 92 46.0 93 33.5 94 21.0 95 19.0 96 17.0 97 15.5 98 14.0 99 9.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030226847734999104 2 0.005342760011271028 3 7.318849330508258E-4 4 7.318849330508256E-5 5 7.318849330508256E-5 6 2.9275397322033026E-4 7 0.0 8 0.0 9 0.0 10 7.318849330508256E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 2.9275397322033026E-4 17 0.0 18 1.4637698661016513E-4 19 0.0 20 6.586964397457431E-4 21 7.318849330508256E-5 22 0.0 23 1.4637698661016513E-4 24 0.0010978273995762386 25 2.1956547991524775E-4 26 2.1956547991524775E-4 27 6.586964397457431E-4 28 0.001390581372796569 29 3.659424665254129E-4 30 0.001171015892881321 31 6.586964397457431E-4 32 9.514504129660735E-4 33 1.4637698661016513E-4 34 0.0010978273995762386 35 3.659424665254129E-4 36 2.1956547991524775E-4 37 0.001756523839321982 38 0.0 39 5.855079464406605E-4 40 0.0 41 0.0010978273995762386 42 0.00483044055813545 43 0.004171744118389707 44 0.0046108750782202015 45 0.0018297123326270644 46 0.0024884087723728078 47 0.0010978273995762386 48 0.00453768658491512 49 0.0037326131585592114 50 0.0018297123326270644 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1366335.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.695039504614954 #Duplication Level Percentage of deduplicated Percentage of total 1 60.05822719738217 19.636061107955506 2 14.314742445724034 9.360421395226718 3 7.338812576730288 7.198283013394856 4 4.282699418994394 5.600921067616529 5 2.9193435838573722 4.772402690088049 6 2.1223721055656988 4.163462390097801 7 1.5908206551136677 3.640836091458916 8 1.192075291599302 3.117995900105166 9 0.9259383202563581 2.7246230963656597 >10 4.929962762460079 27.528613910122434 >50 0.21312546093087947 4.69286357589872 >100 0.10737796406654132 6.489028098045815 >500 0.004277106453280624 0.9356779003800954 >1k 2.251108659621381E-4 0.13880976324367653 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1886 0.13803349837338574 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 7.318849330508258E-5 0.0 6 0.0 0.0 0.0 7.318849330508258E-5 0.0 7 0.0 0.0 0.0 7.318849330508258E-5 0.0 8 0.0 0.0 0.0 7.318849330508258E-5 0.0 9 0.0 0.0 0.0 7.318849330508258E-5 0.0 10 0.0 0.0 0.0 1.4637698661016516E-4 0.0 11 0.0 0.0 0.0 1.4637698661016516E-4 0.0 12 0.0 0.0 0.0 2.1956547991524772E-4 0.0 13 0.0 0.0 0.0 2.1956547991524772E-4 0.0 14 0.0 0.0 0.0 2.1956547991524772E-4 0.0 15 0.0 0.0 0.0 2.1956547991524772E-4 0.0 16 0.0 0.0 0.0 2.927539732203303E-4 0.0 17 0.0 0.0 0.0 3.659424665254129E-4 0.0 18 7.318849330508258E-5 0.0 0.0 4.3913095983049544E-4 0.0 19 7.318849330508258E-5 0.0 0.0 4.3913095983049544E-4 0.0 20 2.927539732203303E-4 0.0 0.0 5.12319453135578E-4 0.0 21 2.927539732203303E-4 0.0 0.0 5.855079464406606E-4 0.0 22 2.927539732203303E-4 0.0 0.0 0.0010978273995762386 0.0 23 2.927539732203303E-4 0.0 0.0 0.0014637698661016515 0.0 24 2.927539732203303E-4 0.0 0.0 0.0017565238393219818 0.0 25 2.927539732203303E-4 0.0 0.0 0.002049277812542312 0.0 26 2.927539732203303E-4 0.0 0.0 0.0026347857589829726 0.0 27 2.927539732203303E-4 0.0 0.0 0.002781162745593138 0.0 28 3.659424665254129E-4 0.0 0.0 0.004098555625084624 0.0 29 3.659424665254129E-4 0.0 0.0 0.005342760011271028 0.0 30 5.855079464406606E-4 0.0 0.0 0.008343488236779413 0.0 31 5.855079464406606E-4 0.0 0.0 0.012734797835084369 0.0 32 6.586964397457431E-4 0.0 0.0 0.018516688806185892 0.0 33 6.586964397457431E-4 0.0 0.0 0.02415220279067725 0.0 34 6.586964397457431E-4 0.0 0.0 0.031763806094405836 0.0 35 6.586964397457431E-4 0.0 0.0 0.04025367131779541 0.0 36 7.318849330508258E-4 0.0 0.0 0.05145151079347305 0.0 37 8.050734263559084E-4 0.0 7.318849330508258E-5 0.07033414206618435 0.0 38 8.050734263559084E-4 0.0 7.318849330508258E-5 0.0932421404706752 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2135 0.0 32.269512 1 GTATCAA 5940 0.0 27.90323 1 TCGCGTC 95 2.6859198E-8 23.157932 24 TTTCGCG 140 1.8553692E-10 20.428606 22 GTTTCGC 110 1.2663986E-7 19.999302 21 TTCGCGT 115 2.0218431E-7 19.130466 23 TATCAAC 9125 0.0 18.226213 2 ATCAACG 9385 0.0 17.627514 3 TCAACGC 9565 0.0 17.272789 4 TGCGCTA 180 2.8558134E-10 17.110514 10 AACGCAG 9820 0.0 16.84666 6 CGTCGTA 105 3.7760532E-5 16.76132 10 CGCGTCT 160 2.1296728E-8 16.500029 25 TGTACCG 160 2.1307642E-8 16.499424 5 CAACGCA 10025 0.0 16.480223 5 GCGCTAT 175 3.6270649E-9 16.342287 11 TAGGACC 500 0.0 16.279432 4 GTATTAG 190 6.1299943E-10 16.218863 1 GTATAGT 195 8.8584784E-10 15.802996 1 CAGAGCG 210 1.5097612E-10 15.7137375 14 >>END_MODULE