##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061952_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1185003 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.285730078320476 32.0 32.0 32.0 32.0 32.0 2 31.447013214312538 32.0 32.0 32.0 32.0 32.0 3 31.571335262442375 32.0 32.0 32.0 32.0 32.0 4 31.65202704128175 32.0 32.0 32.0 32.0 32.0 5 31.625495462880686 32.0 32.0 32.0 32.0 32.0 6 35.268872737031046 36.0 36.0 36.0 36.0 36.0 7 35.27934781599709 36.0 36.0 36.0 36.0 36.0 8 35.22805427496808 36.0 36.0 36.0 36.0 36.0 9 35.30834014766207 36.0 36.0 36.0 36.0 36.0 10 35.1954914882072 36.0 36.0 36.0 36.0 36.0 11 35.310613559628116 36.0 36.0 36.0 36.0 36.0 12 35.23662218576662 36.0 36.0 36.0 36.0 36.0 13 35.26642717360209 36.0 36.0 36.0 36.0 36.0 14 35.22947030513847 36.0 36.0 36.0 36.0 36.0 15 35.207117619111514 36.0 36.0 36.0 36.0 36.0 16 35.219549655148555 36.0 36.0 36.0 36.0 36.0 17 35.19929147858697 36.0 36.0 36.0 36.0 36.0 18 35.19331174689009 36.0 36.0 36.0 36.0 36.0 19 35.19489486524507 36.0 36.0 36.0 36.0 36.0 20 35.1932282027978 36.0 36.0 36.0 36.0 36.0 21 35.18039448001397 36.0 36.0 36.0 36.0 36.0 22 35.16146288237245 36.0 36.0 36.0 36.0 36.0 23 35.12764187094885 36.0 36.0 36.0 36.0 36.0 24 35.11359464912747 36.0 36.0 36.0 36.0 36.0 25 35.10048919707376 36.0 36.0 36.0 36.0 36.0 26 35.059346685198264 36.0 36.0 36.0 36.0 36.0 27 35.039659815207216 36.0 36.0 36.0 36.0 36.0 28 35.02784212360644 36.0 36.0 36.0 36.0 36.0 29 34.99814599625486 36.0 36.0 36.0 36.0 36.0 30 34.98285320796656 36.0 36.0 36.0 36.0 36.0 31 34.981554477077275 36.0 36.0 36.0 36.0 36.0 32 34.95871149693292 36.0 36.0 36.0 36.0 36.0 33 34.93574615422914 36.0 36.0 36.0 36.0 36.0 34 34.93490480614817 36.0 36.0 36.0 36.0 36.0 35 34.91501118562569 36.0 36.0 36.0 36.0 36.0 36 34.895341193229044 36.0 36.0 36.0 32.0 36.0 37 34.87569229782541 36.0 36.0 36.0 32.0 36.0 38 34.86327882714221 36.0 36.0 36.0 32.0 36.0 39 34.83782910254236 36.0 36.0 36.0 32.0 36.0 40 34.836869611300564 36.0 36.0 36.0 32.0 36.0 41 34.80519542988499 36.0 36.0 36.0 32.0 36.0 42 34.77170690707112 36.0 36.0 36.0 32.0 36.0 43 34.77793220776656 36.0 36.0 36.0 32.0 36.0 44 34.731294351153544 36.0 36.0 36.0 32.0 36.0 45 34.71937539398635 36.0 36.0 36.0 32.0 36.0 46 34.69747249585022 36.0 36.0 36.0 32.0 36.0 47 34.670406741586305 36.0 36.0 36.0 32.0 36.0 48 34.6465848609666 36.0 36.0 36.0 32.0 36.0 49 34.62898068612485 36.0 36.0 36.0 32.0 36.0 50 34.23000110548244 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 5.0 21 26.0 22 81.0 23 214.0 24 573.0 25 1301.0 26 2823.0 27 5283.0 28 9114.0 29 14612.0 30 21941.0 31 32056.0 32 49322.0 33 83562.0 34 191552.0 35 772536.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15789966834114 17.743960035487245 12.175400181150398 25.922740115021213 2 16.507292718927143 19.512063388382117 37.038134130667224 26.942509762023516 3 18.95647169322506 23.017656554984434 28.09774523016475 29.92812652162576 4 12.902920920875305 15.783673121502645 34.79147310175586 36.52193285586619 5 14.921422007238814 36.43693127685124 32.868157917166315 15.773488798743628 6 35.43268812885074 34.50610506844309 16.180604371818035 13.880602430888128 7 31.318232949621223 29.73241417954216 19.66332574685465 19.286027123981963 8 28.432333082701057 33.26945163851906 18.47413044523938 19.824084833540507 9 27.19368642948583 14.398528948871858 18.29328702121429 40.11449760042802 10 16.857777455227925 26.44147436038083 30.389147022536672 26.311601161854583 11 37.65602281175659 21.220958934281178 21.43564193508371 19.68737631887852 12 24.775717867380926 23.33158650231265 28.189717663162035 23.70297796714439 13 29.78456594624655 19.318854045095243 24.74913565619665 26.14744435246156 14 23.683062405749183 19.41910695584737 24.550655146020727 32.34717549238272 15 25.528542965714013 26.947273551206198 21.57032513841737 25.953858344662418 16 26.110405529137253 25.701036713235077 23.251490512618197 24.937067245009473 17 24.428798914433127 26.015377176260312 24.531245912457607 25.02457799684895 18 25.113924050632914 25.05552742616034 25.518227848101265 24.312320675105486 19 26.112360991795796 24.7427430502227 24.706793743808028 24.43810221417348 20 26.30365088915687 24.143817842884253 24.489556531271333 25.062974736687543 21 26.90335282417483 24.014325726307405 24.27297529706726 24.809346152450505 22 26.33554514207981 24.180445112797184 24.607026311325793 24.876983433797214 23 24.875991770478024 24.19945282792772 25.195738066264866 25.72881733532939 24 25.146583268072696 24.757973049607084 24.936202100942452 25.159241581377767 25 25.164409421442553 24.296813752585443 25.00651899284303 25.532257833128973 26 24.95430372034383 25.126793462942555 25.184515079350344 24.73438773736327 27 25.518208062974 24.674070904820855 24.66394429690539 25.14377673529975 28 25.253990556842492 24.436511854580438 25.152892230703344 25.15660535787373 29 24.939366781603958 24.692952031824632 25.112447826740052 25.255233359831358 30 25.034662769021487 24.790272314764103 25.142427482449204 25.03263743376521 31 25.601185493235395 24.379742648051632 24.51957481569496 25.49949704301801 32 25.48015051565705 24.61947032598505 24.333139520655397 25.5672396377025 33 24.900084388185654 24.461603375527428 24.938649789029537 25.69966244725738 34 25.554899197461584 24.514806032118415 25.046202921543642 24.88409184887636 35 25.782406383808244 24.358184570775645 25.182827312788714 24.676581732627398 36 24.916076091010815 24.823924347807008 24.80569653046999 25.454303030712182 37 25.768748449338304 24.557924282138572 24.630161910178924 25.043165358344204 38 25.20297416968565 24.410317948562156 24.986012693638752 25.40069518811345 39 25.84990096971201 24.21689278652749 24.507527905275232 25.42567833848527 40 25.999449789958163 24.418102247928694 24.754726152360924 24.82772180975222 41 25.004662482668643 24.94888146829807 25.181457074357528 24.864998974675757 42 25.971444871284188 24.99468325715482 24.654411715063095 24.379460156497903 43 25.571099564454563 24.05854756863364 24.923562240126383 25.446790626785408 44 25.084433372322056 24.653363241566367 24.669481956322503 25.592721429789073 45 25.283615014401224 24.824278103477813 24.630433369986896 25.261673512134074 46 25.09618427548493 24.665538644601316 24.615494972425346 25.622782107488405 47 25.264159907779266 24.623560000438825 24.9557166642897 25.156563427492205 48 25.825259924385634 25.00751080205239 24.106130164731297 25.061099108830675 49 25.349040139616058 25.064136969561947 24.39196465040288 25.194858240419116 50 25.424814428500543 25.18261788305029 24.33163880140558 25.06092888704358 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 130.0 1 87.0 2 44.0 3 83.0 4 122.0 5 145.5 6 169.0 7 136.0 8 103.0 9 141.0 10 179.0 11 302.5 12 426.0 13 785.0 14 1144.0 15 1492.0 16 1840.0 17 1844.5 18 1849.0 19 1752.0 20 1655.0 21 1939.5 22 2224.0 23 2797.5 24 3371.0 25 4450.0 26 5529.0 27 7138.0 28 8747.0 29 10612.5 30 12478.0 31 14456.0 32 16434.0 33 19108.5 34 21783.0 35 25770.0 36 29757.0 37 34895.5 38 40034.0 39 44141.0 40 48248.0 41 53264.0 42 58280.0 43 60791.0 44 63302.0 45 69496.5 46 75691.0 47 81429.0 48 87167.0 49 91212.5 50 95258.0 51 93729.0 52 92200.0 53 91981.5 54 91763.0 55 92411.5 56 93060.0 57 89440.0 58 85820.0 59 79145.0 60 72470.0 61 63128.5 62 53787.0 63 46510.0 64 39233.0 65 32795.5 66 26358.0 67 22447.0 68 18536.0 69 16199.5 70 13863.0 71 10762.5 72 7662.0 73 6817.0 74 5972.0 75 4399.0 76 2826.0 77 2491.0 78 2156.0 79 1827.5 80 1499.0 81 1132.0 82 765.0 83 669.5 84 574.0 85 442.0 86 310.0 87 204.0 88 98.0 89 64.0 90 30.0 91 21.0 92 12.0 93 10.0 94 8.0 95 11.5 96 15.0 97 14.0 98 13.0 99 11.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029704566148777683 2 0.00455695048873294 3 3.3755188805429184E-4 4 0.0 5 1.6877594402714592E-4 6 3.3755188805429184E-4 7 0.0 8 0.0 9 0.0 10 8.438797201357296E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.751037761085837E-4 17 0.0 18 2.531639160407189E-4 19 8.438797201357296E-5 20 3.3755188805429184E-4 21 1.6877594402714592E-4 22 0.0 23 8.438797201357296E-5 24 9.282676921493026E-4 25 3.3755188805429184E-4 26 4.219398600678648E-4 27 5.063278320814378E-4 28 0.0015189834962443132 29 7.594917481221566E-4 30 0.0011814316081900213 31 9.282676921493026E-4 32 8.438797201357295E-4 33 2.531639160407189E-4 34 0.0010970436361764486 35 4.219398600678648E-4 36 8.438797201357296E-5 37 0.002109699300339324 38 0.0 39 0.0010126556641628756 40 8.438797201357296E-5 41 0.0010126556641628756 42 0.005653994124909388 43 0.004388174544705794 44 0.003797458740610783 45 0.0028691910484614806 46 0.0032067429365157723 47 0.001687759440271459 48 0.0036286827965836374 49 0.0032911309085293457 50 0.0012658195802035944 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1185003.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.03434600135058 #Duplication Level Percentage of deduplicated Percentage of total 1 77.97669046792872 46.812796155918484 2 13.785849742226116 16.552489466948646 3 3.9293830110643615 7.076938177741998 4 1.5502145505993847 3.7226446682804664 5 0.7790122601545889 2.3383745782707357 6 0.47011664062223435 1.6933887038464681 7 0.29153258854754455 1.2251377804072865 8 0.20490195527515703 0.9840923903473631 9 0.14692438011669426 0.7938458164763619 >10 0.7527589078160687 8.075078626977069 >50 0.05979736941720022 2.540901407185954 >100 0.047451584787195605 5.850649968899075 >500 0.004660417570431439 1.857942769742083 >1k 7.061238743077938E-4 0.47571948895787286 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1218 0.10278454991253186 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.6877594402714592E-4 6 0.0 0.0 0.0 0.0 2.531639160407189E-4 7 0.0 0.0 0.0 0.0 2.531639160407189E-4 8 0.0 0.0 0.0 0.0 2.531639160407189E-4 9 0.0 0.0 0.0 0.0 2.531639160407189E-4 10 0.0 0.0 0.0 0.0 2.531639160407189E-4 11 0.0 0.0 0.0 0.0 2.531639160407189E-4 12 0.0 0.0 0.0 0.0 4.2193986006786483E-4 13 0.0 0.0 0.0 0.0 5.907158040950107E-4 14 0.0 0.0 0.0 0.0 5.907158040950107E-4 15 0.0 0.0 0.0 0.0 6.751037761085837E-4 16 0.0 0.0 0.0 1.6877594402714592E-4 8.438797201357297E-4 17 0.0 0.0 0.0 2.531639160407189E-4 9.282676921493026E-4 18 0.0 0.0 0.0 2.531639160407189E-4 0.0010126556641628756 19 0.0 0.0 0.0 3.3755188805429184E-4 0.0010126556641628756 20 0.0 0.0 0.0 5.063278320814378E-4 0.0012658195802035944 21 0.0 0.0 0.0 5.907158040950107E-4 0.0012658195802035944 22 0.0 0.0 0.0 6.751037761085837E-4 0.0013502075522171674 23 0.0 0.0 0.0 9.282676921493026E-4 0.0013502075522171674 24 0.0 0.0 0.0 0.0012658195802035944 0.0014345955242307403 25 0.0 0.0 0.0 0.0016033714682578862 0.0014345955242307403 26 0.0 0.0 0.0 0.002362863216380043 0.0014345955242307403 27 0.0 0.0 0.0 0.0030379669924886265 0.0014345955242307403 28 0.0 0.0 0.0 0.0037130707685972104 0.0014345955242307403 29 0.0 0.0 0.0 0.004219398600678648 0.0014345955242307403 30 0.0 0.0 0.0 0.005822770068936534 0.0014345955242307403 31 0.0 0.0 0.0 0.008185633285316577 0.0015189834962443132 32 0.0 0.0 0.0 0.011561152165859496 0.0016033714682578862 33 0.0 0.0 0.0 0.013755239438212392 0.0016033714682578862 34 0.0 0.0 0.0 0.016624430486673874 0.0016877594402714593 35 0.0 0.0 0.0 0.02050627719929823 0.0016877594402714593 36 0.0 0.0 0.0 0.025316391604071887 0.0016877594402714593 37 0.0 1.6877594402714592E-4 0.0 0.03375518880542919 0.0016877594402714593 38 0.0 1.6877594402714592E-4 0.0 0.04405052139108508 0.0016877594402714593 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 730 0.0 28.631866 1 GTATCAA 1520 0.0 26.198952 1 GTCCTAA 205 0.0 18.245005 1 GCTAGAC 85 1.4310655E-4 18.117212 3 TCTATTC 125 4.8535003E-7 17.599577 3 TATACTG 165 1.6589183E-9 17.332918 5 GTCCTAT 305 0.0 17.312523 1 CTTACAC 320 0.0 17.187088 3 GTCCTAC 360 0.0 17.112146 1 ATCAACG 2350 0.0 16.944275 3 CGCAATA 260 0.0 16.924099 36 AGTGATC 145 1.2495002E-7 16.689257 8 TAGGACG 185 4.2200554E-10 16.648249 4 TCAACGC 2385 0.0 16.603376 4 CTATTCC 320 0.0 16.499605 4 CAACGCA 2435 0.0 16.262444 5 GTGTATA 325 0.0 16.247135 1 CGGATCG 95 3.3457793E-4 16.210821 26 CCCGTAC 95 3.346855E-4 16.210138 3 AACGCAG 2465 0.0 16.064524 6 >>END_MODULE