##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061950_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 781515 Sequences flagged as poor quality 0 Sequence length 25 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278648522421193 32.0 32.0 32.0 32.0 32.0 2 31.01156343768194 32.0 32.0 32.0 32.0 32.0 3 31.021134591146684 32.0 32.0 32.0 32.0 32.0 4 30.999984645208347 32.0 32.0 32.0 32.0 32.0 5 31.015916521116036 32.0 32.0 32.0 32.0 32.0 6 34.669920602931484 36.0 36.0 36.0 32.0 36.0 7 34.59623807604461 36.0 36.0 36.0 32.0 36.0 8 34.55985361765289 36.0 36.0 36.0 32.0 36.0 9 34.59079224327108 36.0 36.0 36.0 32.0 36.0 10 34.40683160272036 36.0 36.0 36.0 32.0 36.0 11 34.58411674759921 36.0 36.0 36.0 32.0 36.0 12 34.45639047235178 36.0 36.0 36.0 32.0 36.0 13 34.44663122268926 36.0 36.0 36.0 32.0 36.0 14 34.410956923411575 36.0 36.0 36.0 32.0 36.0 15 34.363193284837784 36.0 36.0 36.0 32.0 36.0 16 34.33860130643686 36.0 36.0 36.0 32.0 36.0 17 34.28995220821098 36.0 36.0 36.0 32.0 36.0 18 34.24470547590257 36.0 36.0 36.0 32.0 36.0 19 34.213608184103954 36.0 36.0 36.0 32.0 36.0 20 34.15440778487937 36.0 36.0 36.0 32.0 36.0 21 34.067658330294364 36.0 36.0 36.0 32.0 36.0 22 33.96192907365822 36.0 36.0 36.0 32.0 36.0 23 33.89220168518838 36.0 36.0 36.0 32.0 36.0 24 33.82325995022488 36.0 36.0 36.0 32.0 36.0 25 33.35851263251505 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 7.0 5 75.0 6 204.0 7 21.0 8 143.0 9 109.0 10 69.0 11 12.0 12 30.0 13 33.0 14 187.0 15 249.0 16 360.0 17 510.0 18 639.0 19 845.0 20 1200.0 21 1573.0 22 2245.0 23 3104.0 24 4205.0 25 5644.0 26 7627.0 27 9805.0 28 13182.0 29 18431.0 30 24622.0 31 34277.0 32 48880.0 33 69581.0 34 155144.0 35 378498.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.34566849134875 18.295572906669943 12.848653753138173 25.510104848843127 2 12.826497252132077 20.31925170982003 42.7579764943731 24.096274543674788 3 19.34900635050217 26.278257687332136 28.344634062389236 26.028101899776455 4 12.111540528780937 17.93798469453047 36.1421514678406 33.808323308847996 5 12.169098822324628 38.767537122375835 34.98489503328213 14.078469022017408 6 31.887058690964594 35.093447652412635 18.937170602787294 14.082323053835477 7 27.942395318658882 31.095997981120398 22.23470500146676 18.726901698753956 8 25.7403939031358 38.27616775856459 19.8590055316565 16.124432806643114 9 26.876712785079825 16.246715360263 19.544359131714852 37.33221272294232 10 16.89679562088689 28.294713697029337 32.76172683846895 22.04676384361482 11 33.24871437706395 21.117149626903444 25.354163009171398 20.279972986861207 12 25.99916712047923 23.731043982445463 30.966076176442325 19.303712720632987 13 31.426147924536036 22.17484227088918 24.65276532060908 21.7462444839657 14 21.746215785124495 23.69382931157076 24.90055025655151 29.65940464675323 15 23.377087663277884 33.296515457101194 23.242928789443607 20.083468090177313 16 21.568524452382203 25.99699942474027 31.48733467688724 20.947141445990287 17 21.494491302292268 29.15413719277431 29.38258254718492 19.9687889577485 18 22.769712467267595 23.98715301086895 34.2182399573646 19.024894564498855 19 24.637150231524473 27.499855897629676 25.929844561576544 21.933149309269304 20 24.582506116070856 26.0735465525854 29.92545438243695 19.418492948906792 21 22.012608421667426 27.085692182368703 24.655330529184834 26.246368866779036 22 23.471143192022186 31.096180820198168 24.61286211114883 20.81981387663082 23 19.424430026664073 30.862317597006246 27.155729957762674 22.557522418567004 24 23.282172403325568 28.6265960839666 27.713743005024728 20.377488507683104 25 22.859572702227425 27.859015557778438 27.095791702262005 22.18562003773213 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 417.0 1 417.0 2 496.5 3 576.0 4 576.0 5 576.0 6 1305.5 7 2035.0 8 2035.0 9 2035.0 10 1838.5 11 1642.0 12 1642.0 13 1642.0 14 1914.5 15 2187.0 16 2187.0 17 2187.0 18 3793.0 19 5399.0 20 5399.0 21 5399.0 22 10584.0 23 15769.0 24 15769.0 25 15769.0 26 26469.0 27 37169.0 28 37169.0 29 37169.0 30 49944.5 31 62720.0 32 62720.0 33 62720.0 34 67627.5 35 72535.0 36 72535.0 37 72535.0 38 75826.5 39 79118.0 40 79118.0 41 79118.0 42 87326.0 43 95534.0 44 95534.0 45 95534.0 46 119714.5 47 143895.0 48 143895.0 49 143895.0 50 119187.5 51 94480.0 52 94480.0 53 94480.0 54 75814.5 55 57149.0 56 57149.0 57 57149.0 58 49716.5 59 42284.0 60 42284.0 61 42284.0 62 36549.0 63 30814.0 64 30814.0 65 30814.0 66 24860.0 67 18906.0 68 18906.0 69 18906.0 70 14183.0 71 9460.0 72 9460.0 73 9460.0 74 7134.0 75 4808.0 76 4808.0 77 4808.0 78 3673.5 79 2539.0 80 2539.0 81 2539.0 82 1805.0 83 1071.0 84 1071.0 85 1071.0 86 766.0 87 461.0 88 461.0 89 461.0 90 327.5 91 194.0 92 194.0 93 194.0 94 122.0 95 50.0 96 50.0 97 50.0 98 176.5 99 303.0 100 303.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0011516093741003053 2 0.0 3 2.5591319424451227E-4 4 0.012155876726614332 5 0.04030632809351068 6 0.06948043223738508 7 0.11311363185607443 8 0.11733619956110887 9 0.12642111795678906 10 0.1385769946834034 11 0.14766191307908358 12 0.1394726908632592 13 0.13601786274095828 14 0.12411789920858844 15 0.14036838704311497 16 0.12770068392801162 17 0.13077164225894575 18 0.12066307108628753 19 0.10492440964025003 20 0.10044592874097107 21 0.09814270999277046 22 0.1087631075539177 23 0.08816209541723447 24 0.09929431936687076 25 0.09571153464744758 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 781515.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.76713532826468 #Duplication Level Percentage of deduplicated Percentage of total 1 78.07877051126593 36.51520426764895 2 13.005872423900417 12.164947914213931 3 3.904516652400441 5.478091760228232 4 1.580023944439106 2.955727745259289 5 0.8128404398424464 1.900710942519894 6 0.507247855394722 1.4233517458930196 7 0.3344650421034871 1.0949380320639266 8 0.23801147296444572 0.8904891812646275 9 0.18701746263875643 0.7871643885577866 >10 1.1298169809909915 10.008733013281084 >50 0.11455460213315392 3.8055453306046996 >100 0.0868087027471854 8.179843240803555 >500 0.010439021216417762 3.541014298997157 >1k 0.0090654657932049 9.008632270723483 >5k 5.494221692851454E-4 2.2456058679403275 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 9389 1.2013844903808628 No Hit TCCATGTACTCTGCGTTGATACCAC 8090 1.035168870719052 No Hit GTCCTAAAGTGTGTATTTCTCATTT 4255 0.5444553207551999 No Hit GTACATGGGAAGCAGTGGTATCAAC 4209 0.5385693172875761 No Hit CCCATGTACTCTGCGTTGATACCAC 4132 0.5287166593091623 No Hit CTGTAGGACGTGGAATATGGCAAGA 4058 0.5192478711221153 No Hit GTCCTACAGTGGACATTTCTAAATT 4041 0.517072608971037 No Hit CTTTAGGACGTGAAATATGGCGAGG 3806 0.48700280864730683 No Hit GAGTACATGGAAGCAGTGGTATCAA 3641 0.4658899701221346 No Hit CATGTACTCTGCGTTGATACCACTG 3129 0.40037619239553945 No Hit GTCCTACAGTGTGCATTTCTCATTT 2671 0.3417720709135461 No Hit GCTTCCATGTACTCTGCGTTGATAC 2655 0.33972476535959006 No Hit CATGGAAGCAGTGGTATCAACGCAG 2270 0.2904614754675214 No Hit GCGTTGATACCACTGCTTCCATGTA 2133 0.2729314216617723 No Hit CTGTAGGACCTGGAATATGGCGAGA 2047 0.2619271543092583 No Hit GTATCAACGCAGAGTACATGGGAAG 1910 0.2443971005035092 No Hit CTGAAGGACCTGGAATATGGCGAGA 1829 0.23403261613660647 No Hit ATTTAGAAATGTCCACTGTAGGACG 1683 0.21535095295675707 No Hit GTATCAACGCAGAGTACATGGAAGC 1603 0.2051144251869766 No Hit GTCCTTCAGTGTGCATTTCTCATTT 1531 0.19590155019417413 No Hit GTATCAACGCAGAGTACTTTTTTTT 1515 0.19385424464021803 No Hit TTTCTAAATTTTCCACCTTTTTCAG 1507 0.19283059186324 No Hit CAGTGGTATCAACGCAGAGTACATG 1500 0.1919348956833842 No Hit ACTCTGCGTTGATACCACTGCTTCC 1467 0.18771232797834975 No Hit GAGTACATGGGAAGCAGTGGTATCA 1289 0.16493605369058817 No Hit GAATATGGCAAGAAAACTGAAAATC 1259 0.16109735577692047 No Hit GGTATCAACGCAGAGTACATGGGAA 1255 0.16058552938843146 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1201 0.1536758731438296 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1140 0.14587052071937198 No Hit GGAATATGGCGAGAAAACTGAAAAT 1125 0.14395117176253816 No Hit TATCAACGCAGAGTACATGGGAAGC 1122 0.14356730197117137 No Hit GCTTCCCATGTACTCTGCGTTGATA 1056 0.13512216656110249 No Hit TATCAACGCAGAGTACTTTTTTTTT 1046 0.13384260058987993 No Hit TATCAACGCAGAGTACATGGAAGCA 1032 0.13205120823016833 No Hit GAAATATGGCGAGGAAAACTGAAAA 1003 0.12834046691362289 No Hit GCGTTGATACCACTGCTTCCCATGT 996 0.12744477073376712 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 948 0.12130285407189881 No Hit GCCATATTCCACGTCCTACAGTGGA 915 0.11708028636686436 No Hit ACGCAGAGTACATGGGAAGCAGTGG 914 0.1169523297697421 No Hit GGTATCAACGCAGAGTACATGGAAG 909 0.11631254678413083 No Hit CTGTAGGACATGGAATATGGCAAGA 901 0.11528889400715277 No Hit AAAAAGTACTCTGCGTTGATACCAC 895 0.11452115442441924 No Hit GTCCACTGTAGGACGTGGAATATGG 847 0.10837923776255096 No Hit GTACTCTGCGTTGATACCACTGCTT 841 0.1076114981798174 No Hit CCATATTTCACGTCCTAAAGTGTGT 827 0.10582010582010583 No Hit ACAGTGGACATTTCTAAATTTTCCA 825 0.10556419262586132 No Hit GTGGTATCAACGCAGAGTACATGGA 803 0.10274914748917169 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.2795659712225613E-4 0.0 9 0.0 0.0 0.0 1.2795659712225613E-4 0.0 10 0.0 0.0 0.0 1.2795659712225613E-4 0.0 11 0.0 0.0 0.0 1.2795659712225613E-4 0.0 12 0.0 0.0 0.0 1.2795659712225613E-4 1.2795659712225613E-4 13 0.0 0.0 0.0 2.5591319424451227E-4 1.2795659712225613E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAT 30 7.7113626E-4 19.002436 8 TAGCGTA 25 0.006024982 19.002436 7 GTATAGT 40 0.005291713 14.243608 1 TAGAAAT 525 0.0 13.751499 4 GTATTAG 90 3.6508936E-8 13.716068 1 TAGGACC 925 0.0 13.658583 4 GTATTAA 70 7.2851453E-6 13.565342 1 AATCTGC 50 0.0014969333 13.301704 6 ACCTCCG 50 0.0014991045 13.299147 19 GTTATAT 75 1.4831752E-5 12.660985 1 AAATGTC 535 0.0 12.609093 7 ATGTCCA 520 0.0 12.607385 9 ATAGGAC 175 0.0 12.483314 3 AATGTCC 540 0.0 12.316394 8 GAAATGT 570 0.0 12.168226 6 CGAGCCG 55 0.0030660909 12.090909 15 TGTCCAC 555 0.0 11.8123255 10 TATAGGA 170 1.8189894E-12 11.733038 2 GACAGTT 65 8.006947E-4 11.693806 7 AGGACCT 1545 0.0 11.684345 5 >>END_MODULE