##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4061950_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 781515 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.118385443657512 32.0 32.0 32.0 32.0 32.0 2 31.509583309341473 32.0 32.0 32.0 32.0 32.0 3 31.624932342949272 32.0 32.0 32.0 32.0 32.0 4 31.70955004062622 32.0 32.0 32.0 32.0 32.0 5 31.70011068245651 32.0 32.0 32.0 32.0 32.0 6 35.36833458091016 36.0 36.0 36.0 36.0 36.0 7 35.3691509439998 36.0 36.0 36.0 36.0 36.0 8 35.34194481231966 36.0 36.0 36.0 36.0 36.0 9 35.38116350933763 36.0 36.0 36.0 36.0 36.0 10 35.29631293065392 36.0 36.0 36.0 36.0 36.0 11 35.37624869644217 36.0 36.0 36.0 36.0 36.0 12 35.3131302662137 36.0 36.0 36.0 36.0 36.0 13 35.293724368694136 36.0 36.0 36.0 36.0 36.0 14 35.270606450292064 36.0 36.0 36.0 36.0 36.0 15 35.235840642853944 36.0 36.0 36.0 36.0 36.0 16 35.21342264703812 36.0 36.0 36.0 36.0 36.0 17 35.22319213322841 36.0 36.0 36.0 36.0 36.0 18 35.18098948836555 36.0 36.0 36.0 36.0 36.0 19 35.14284946546132 36.0 36.0 36.0 36.0 36.0 20 35.12060293148564 36.0 36.0 36.0 36.0 36.0 21 35.03968317946553 36.0 36.0 36.0 36.0 36.0 22 34.94856528665477 36.0 36.0 36.0 36.0 36.0 23 34.89660978995924 36.0 36.0 36.0 36.0 36.0 24 34.83842280698387 36.0 36.0 36.0 32.0 36.0 25 34.737489363607864 36.0 36.0 36.0 32.0 36.0 26 34.6723300256553 36.0 36.0 36.0 32.0 36.0 27 34.51892030223348 36.0 36.0 36.0 32.0 36.0 28 34.39419460918856 36.0 36.0 36.0 32.0 36.0 29 34.339468852165346 36.0 36.0 36.0 32.0 36.0 30 34.248902452288185 36.0 36.0 36.0 32.0 36.0 31 34.2186036096556 36.0 36.0 36.0 32.0 36.0 32 34.163943110496916 36.0 36.0 36.0 32.0 36.0 33 34.16499107502735 36.0 36.0 36.0 32.0 36.0 34 34.10676442550687 36.0 36.0 36.0 32.0 36.0 35 33.98534129223368 36.0 36.0 36.0 32.0 36.0 36 33.85597077471322 36.0 36.0 36.0 32.0 36.0 37 33.64562164513797 36.0 36.0 36.0 27.0 36.0 38 33.57469274422116 36.0 36.0 36.0 21.0 36.0 39 33.16794815198685 36.0 36.0 36.0 14.0 36.0 40 33.15059339871915 36.0 36.0 36.0 14.0 36.0 41 33.16800701202152 36.0 36.0 36.0 14.0 36.0 42 32.951059160732676 36.0 36.0 36.0 14.0 36.0 43 33.04941427867667 36.0 36.0 36.0 14.0 36.0 44 32.9804136836785 36.0 36.0 36.0 14.0 36.0 45 32.71988637454176 36.0 36.0 36.0 14.0 36.0 46 32.759218952931164 36.0 36.0 36.0 14.0 36.0 47 32.65338989014926 36.0 36.0 36.0 14.0 36.0 48 32.71278606296744 36.0 36.0 36.0 14.0 36.0 49 32.71094092883694 36.0 36.0 36.0 14.0 36.0 50 32.36088622739167 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 5.0 19 6.0 20 22.0 21 54.0 22 178.0 23 482.0 24 1333.0 25 3401.0 26 7218.0 27 12993.0 28 18625.0 29 22887.0 30 28397.0 31 35840.0 32 48118.0 33 60254.0 34 121772.0 35 419930.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.84811199158297 18.978129283873884 13.309432170316907 25.864326554226242 2 12.388193774424622 20.842727828777484 42.355717184952766 24.413361211845125 3 19.046235895966035 26.307910031042308 28.74778954695629 25.898064526035363 4 12.010773945477695 17.94284178806549 36.35989072506606 33.68649354139076 5 11.961894525376993 39.017421290698195 34.85141040159178 14.169273782333033 6 32.267025628492426 35.02104251624733 18.657527130066935 14.054404725193312 7 27.959412167392824 31.009129703204675 22.271869381905656 18.75958874749685 8 26.000140752256833 38.18672706218051 19.92117873617269 15.891953449389968 9 26.929361560558657 15.871480393850407 19.593481890942595 37.60567615464834 10 16.957747343934138 28.374064155042845 32.882882306500335 21.785306194522676 11 33.456683492959186 20.712846202568088 25.651842894890052 20.17862740958267 12 25.97416556304102 23.619764175991502 31.08628753126939 19.319782729698087 13 31.776741329341085 21.835537385718766 24.73234678796952 21.655374496970627 14 21.7661849100785 23.349775756063543 25.257096792767893 29.626942541090063 15 23.411450835876472 33.28343026045565 23.239221256149914 20.06589764751796 16 21.86550309978823 25.719093287950813 31.41541001017268 20.999993602088278 17 21.635157354625314 29.025802447809703 29.33648106562254 20.002559131942448 18 22.881641124331907 23.77490841483123 34.414014866035494 18.929435594801365 19 25.01820182594064 27.02648061777445 26.12054791014888 21.83476964613603 20 24.78832725751203 25.702067655944305 30.1297611172175 19.379843969326167 21 22.189465333358925 26.72475896176017 24.87284313160976 26.212932573271146 22 23.61669321766057 30.67836189964364 24.784297166401156 20.92064771629463 23 19.74459863214398 30.060971318528757 27.483797495889394 22.710632553437872 24 23.669269757020732 28.05489906040509 27.802182194145413 20.473648988428767 25 23.284261978336946 27.15047056038592 27.234793957889487 22.33047350338765 26 19.27934383437192 28.574682345715345 29.275888984146075 22.870084835766658 27 22.338152234275874 29.417304537649102 27.21834509268003 21.026198135394996 28 20.953402192717558 27.838658163317536 26.49316183320196 24.714777810762946 29 22.266637662985758 27.440083940064746 27.185448682678405 23.10782971427109 30 22.21652089904606 26.366003621264372 29.109847151933156 22.307628327756415 31 23.858202528697685 25.28428975226133 27.414015705513307 23.443492013527674 32 20.72900458602899 28.925891614118417 28.265882196380314 22.07922160347228 33 19.41377739561261 29.502298109306064 29.999155483217148 21.084769011864182 34 20.179014715291107 29.35278310940499 30.236980166346765 20.231222008957133 35 21.19967447716734 29.436016337561032 28.90051592298007 20.463793262291556 36 20.45542661696794 28.595320079487248 29.999014726637824 20.950238576906983 37 21.729077201046206 28.62025458993822 26.487155338762264 23.16351287025331 38 22.192920161481226 30.652898536816313 25.360485723242675 21.793695578459786 39 23.620510733803965 27.24826392221143 27.139243227473216 21.991982116511387 40 24.878345265286015 27.128973852069375 27.674836695392923 20.317844187251684 41 23.369665359771517 26.066800085988923 29.0307308034846 21.53280375075496 42 23.22902457189217 29.59324957579511 28.329592481784143 18.848133370528576 43 21.015926313607363 29.03564290046758 27.97802614034504 21.970404645580018 44 20.47487123708372 29.146549793659425 28.995553280655173 21.383025688601684 45 21.498602665683926 29.585611039452942 27.33516061666974 21.580625678193396 46 21.19029795837412 26.80473713506977 29.331976941336045 22.672987965220063 47 25.032085527283893 26.135213466324593 28.282480598332704 20.55022040805881 48 20.406259477319054 30.568632745169044 26.190095345828574 22.835012431683325 49 22.218511352701515 27.19837028847532 28.91791044776119 21.665207911061973 50 20.0837885529072 32.88112083184579 24.9917145558938 22.04337605935321 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 221.0 1 154.5 2 88.0 3 329.0 4 570.0 5 488.0 6 406.0 7 334.0 8 262.0 9 357.0 10 452.0 11 619.0 12 786.0 13 1235.0 14 1684.0 15 1948.0 16 2212.0 17 2290.5 18 2369.0 19 2307.0 20 2245.0 21 2536.5 22 2828.0 23 3178.5 24 3529.0 25 4616.5 26 5704.0 27 8373.0 28 11042.0 29 15457.5 30 19873.0 31 25476.0 32 31079.0 33 40285.5 34 49492.0 35 58038.5 36 66585.0 37 65663.5 38 64742.0 39 59139.5 40 53537.0 41 49931.0 42 46325.0 43 45758.0 44 45191.0 45 48221.0 46 51251.0 47 53681.0 48 56111.0 49 52388.5 50 48666.0 51 43615.5 52 38565.0 53 36001.0 54 33437.0 55 32368.0 56 31299.0 57 30188.0 58 29077.0 59 26502.0 60 23927.0 61 20944.5 62 17962.0 63 15507.0 64 13052.0 65 10907.0 66 8762.0 67 7470.5 68 6179.0 69 5352.0 70 4525.0 71 3638.5 72 2752.0 73 2279.0 74 1806.0 75 1430.0 76 1054.0 77 892.0 78 730.0 79 620.5 80 511.0 81 397.0 82 283.0 83 225.0 84 167.0 85 135.5 86 104.0 87 70.5 88 37.0 89 26.5 90 16.0 91 9.5 92 3.0 93 3.0 94 3.0 95 3.5 96 4.0 97 6.0 98 8.0 99 5.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030965496503585984 2 0.003710741316545428 3 1.2795659712225613E-4 4 0.0 5 0.0 6 2.5591319424451227E-4 7 0.0 8 0.0 9 0.0 10 2.5591319424451227E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0012795659712225614 17 0.0 18 2.5591319424451227E-4 19 0.0 20 2.5591319424451227E-4 21 0.0 22 0.0 23 0.0 24 0.001023652776978049 25 0.0 26 6.397829856112807E-4 27 0.0011516093741003053 28 0.0024311753453228665 29 6.397829856112807E-4 30 0.002559131942445123 31 7.677395827335367E-4 32 0.0014075225683448174 33 3.8386979136676835E-4 34 0.0019193489568338417 35 3.8386979136676835E-4 36 7.677395827335367E-4 37 0.0029430017338118912 38 0.0 39 0.0015354791654670734 40 0.0 41 0.0024311753453228665 42 0.006781699647479575 43 0.005246220482012501 44 0.005118263884890246 45 0.0034548281223009156 46 0.0038386979136676835 47 0.0012795659712225614 48 0.00563009027337927 49 0.0034548281223009156 50 0.0030709583309341468 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 781515.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.22522979173828 #Duplication Level Percentage of deduplicated Percentage of total 1 80.55854584576622 49.3221548109532 2 11.975165168661565 14.663644784906493 3 3.4493656991630512 6.335646227009933 4 1.3532028129466247 3.314006127099349 5 0.7201241924438972 2.204488458048379 6 0.4130650123033335 1.5174000178319274 7 0.26284404891919894 1.1264881106128195 8 0.2089783408364586 1.0235797551366705 9 0.14120742266301223 0.7780911210757832 >10 0.7997812832780613 9.11876371084645 >50 0.07422920138994736 3.141971880955751 >100 0.038681873809509444 4.454848744531307 >500 0.0033454593524448735 1.4478674463723509 >1k 0.0014636384666946321 1.5510488046195758 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2103 0.26909272374810467 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1962 0.25105084355386653 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1942 0.2484917116114214 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1684 0.21547890955387933 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1652 0.21138429844596712 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1532 0.19602950679129638 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1241 0.15879413702871986 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 959 0.12271037664024363 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 903 0.11554480720139729 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 872 0.11157815269060734 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 824 0.10543623602873906 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 782 0.1000620589496043 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.2795659712225613E-4 0.0 11 0.0 0.0 0.0 1.2795659712225613E-4 0.0 12 0.0 0.0 0.0 1.2795659712225613E-4 1.2795659712225613E-4 13 0.0 0.0 0.0 2.5591319424451227E-4 1.2795659712225613E-4 14 0.0 0.0 0.0 3.838697913667684E-4 1.2795659712225613E-4 15 0.0 0.0 0.0 5.118263884890245E-4 1.2795659712225613E-4 16 0.0 0.0 0.0 0.001023652776978049 1.2795659712225613E-4 17 0.0 0.0 0.0 0.001023652776978049 1.2795659712225613E-4 18 0.0 0.0 0.0 0.002047305553956098 1.2795659712225613E-4 19 0.0 0.0 0.0 0.002047305553956098 1.2795659712225613E-4 20 0.0 0.0 0.0 0.003070958330934147 1.2795659712225613E-4 21 0.0 0.0 0.0 0.004478480899278965 1.2795659712225613E-4 22 0.0 0.0 0.0 0.005758046870501526 1.2795659712225613E-4 23 0.0 0.0 0.0 0.008445135410068905 1.2795659712225613E-4 24 0.0 0.0 0.0 0.012283833323736589 1.2795659712225613E-4 25 0.0 0.0 0.0 0.01420318228057043 1.2795659712225613E-4 26 0.0 0.0 0.0 0.01816983679136037 1.2795659712225613E-4 27 0.0 0.0 0.0 0.02149670831653903 1.2795659712225613E-4 28 0.0 0.0 0.0 0.027254755187040555 2.5591319424451227E-4 29 0.0 0.0 0.0 0.03288484546041982 2.5591319424451227E-4 30 0.0 0.0 0.0 0.03800310934531007 2.5591319424451227E-4 31 0.0 0.0 0.0 0.047343940935234766 2.5591319424451227E-4 32 0.0 0.0 0.0 0.06090734023019392 2.5591319424451227E-4 33 0.0 0.0 0.0 0.07344708674817502 2.5591319424451227E-4 34 0.0 0.0 0.0 0.08931370479133478 2.5591319424451227E-4 35 0.0 0.0 0.0 0.1053082794316168 2.5591319424451227E-4 36 0.0 0.0 0.0 0.12718885753952258 2.5591319424451227E-4 37 0.0 0.0 0.0 0.16096939917979822 2.5591319424451227E-4 38 0.0 0.0 0.0 0.19270263526611772 2.5591319424451227E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAA 25 0.0023521013 35.20056 20 CGCGAAA 25 0.0023521013 35.20056 21 GCGATTA 30 0.005741543 29.335678 42 GGCGCGA 30 0.005743339 29.333801 19 TCGCGAG 30 0.005743339 29.333801 18 TATCGCG 30 0.0057451352 29.331924 16 ATCGCGA 30 0.0057451352 29.331924 17 TAGGACC 1045 0.0 25.472462 4 AATAGCG 45 0.0013981629 24.443272 5 ACGCTAT 85 2.351535E-7 23.293001 10 CTATACT 95 2.683555E-8 23.156784 4 TGTCGAG 125 4.0017767E-11 22.880367 18 TATGTCG 125 4.0017767E-11 22.878902 16 CGAATGC 70 3.2099077E-5 22.003168 43 TCGAGGA 110 5.2459654E-9 22.000353 20 TACGCTA 90 4.079866E-7 21.998943 9 CGATGGA 50 0.0025803484 21.998943 31 ACCGTCG 50 0.0025803484 21.998943 8 ATTACCG 95 6.8630834E-7 20.841105 27 AGGACCT 1865 0.0 20.524485 5 >>END_MODULE