SRR4050269_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4050269_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1146234
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	16158	1.409659807683248	No Hit
TATCAACGCAGAGTACTTTTTTTTT	10317	0.9000779945456163	No Hit
GGTATCAACGCAGAGTACTTTTTTT	8005	0.6983739794841193	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	7520	0.6560615022761496	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	5530	0.48244948239190255	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	5058	0.4412711540575484	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA	4300	0.37514155050364933	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	2741	0.2391309278908146	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNN	2500	0.21810555261840078	No Hit
GNNNNNNNNNNNNNNNNNNNNNNNN	2048	0.1786720687049939	No Hit
ATCAACGCAGAGTACTTTTTTTTTT	1601	0.13967479589682386	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTCCA	90	3.637797E-8	13.721493	10
GTCTATA	50	0.0014982291	13.301046	1
CGCTACA	50	0.0014987254	13.300462	2
GCGCTAC	60	4.0878166E-4	12.667663	1
CGCCAGT	135	2.7284841E-11	12.667106	18
GGTCCAA	105	1.9914296E-8	12.66655	11
CGCAGAT	145	7.2759576E-12	12.44816	8
TTAGAGT	140	5.2750693E-11	12.214708	4
CGAACGA	55	0.0030688008	12.090265	16
GTCCTTA	80	2.8624772E-5	11.875933	1
GGTATCA	3300	0.0	11.861538	1
TAGAGTG	130	2.6102498E-9	11.692713	5
AGATTAC	140	6.7848305E-10	11.535607	11
TCGCCAG	150	1.7644197E-10	11.400394	17
GCATCGC	145	1.2169039E-9	11.137339	14
ATAGTAC	60	0.005872503	11.083717	3
ACGATCA	60	0.005874424	11.083231	9
TTACGGG	60	0.0058763456	11.082744	14
CATCGCC	155	3.1286618E-10	11.031671	15
GTATCAA	7835	0.0	10.986186	1