SRR3560070.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3560070.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3794336
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	108508	2.8597361962672783	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	48996	1.2912931274404797	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35098	0.9250103311883818	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15119	0.3984623396557395	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	11340	0.2988665210461066	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	8624	0.22728614440049588	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7754	0.20435723141018614	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6889	0.18156009378188964	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	6217	0.16384948512730554	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5361	0.14128954315063294	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5157	0.13591310838049134	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	4496	0.11849240552233645	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4402	0.11601502871648689	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3876	0.1021522606326904	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3814	0.1005182461437258	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	905	65.63421	1
TACAACG	760	56.36545	2
GTATCAA	51815	52.61705	1
TATCACG	715	44.10257	2
TAACGCA	965	43.774895	4
ACAACGC	975	43.32592	3
TATCAAC	64145	42.592503	2
GTATAAC	1180	41.694187	1
ATCAACG	65505	41.690037	3
TCAACGC	66930	41.30023	4
AACGCAG	68965	41.14052	6
CAACGCA	67470	41.108604	5
ATAGTAC	1545	38.509296	4
ACGCAGA	75150	37.730816	7
CGCAGAG	76060	37.420193	8
GCATAGT	1595	37.30211	2
TAGTACT	1595	37.300144	5
AGATTAC	1695	36.85646	2
GCAGAGT	79210	35.849457	9
TCACGCA	955	34.888214	4