SRR3559761.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559761.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2464019
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75770	3.075057456943311	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32508	1.319308008582726	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25858	1.04942372603458	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12618	0.5120902070966173	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9023	0.3661903581100633	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6606	0.2680985820320379	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4932	0.200160794214655	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4747	0.1926527352264735	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3327	0.13502330947935062	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2631	0.10677677404273263	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	26715	64.258766	1
CGCATAG	725	58.43432	1
TAACGCA	560	50.99839	4
TATCAAC	34395	49.74942	2
ATCAACG	34775	49.18968	3
TCAACGC	35700	48.71513	4
CAACGCA	36350	47.90949	5
AACGCAG	37445	47.509518	6
TACAACG	610	46.81724	2
GGTATCA	12215	45.966755	1
ACAACGC	625	44.742588	3
ACGCAGA	41875	42.44081	7
CGCAGAG	42375	42.012794	8
ATAGTAC	1015	41.619377	4
GTATAAC	805	41.508766	1
GCAGAGT	43815	40.455482	9
TATCACG	405	38.19555	2
ATAACGC	940	37.977524	3
TAGTACT	1120	36.655094	5
GTACAAC	885	35.73389	1