SRR3559757.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559757.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2075969
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	50922	2.4529268018934776	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23633	1.1384081361523222	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19352	0.9321911839724004	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9343	0.4500548900296681	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7217	0.34764488294382045	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4927	0.23733495057007112	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3535	0.1702819261751982	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3514	0.1692703503761376	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3231	0.15563816222689258	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2874	0.1384413736428627	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	2473	0.1191250929084201	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2398	0.11551232219748947	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2292	0.1104062729260408	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	2148	0.10346975316105395	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	21250	53.41951	1
TAACGCA	405	51.41767	4
CGCATAG	470	50.76708	1
TATCAAC	26960	41.974934	2
ATCAACG	27390	41.20735	3
TCAACGC	28170	40.868954	4
CAACGCA	28445	40.55751	5
GGTATCA	11755	40.29192	1
AACGCAG	29340	40.030075	6
CATGGGT	3545	39.10561	4
TATCACG	335	39.073044	2
TACAACG	470	37.977184	2
TACTGGT	1390	36.81146	2
GTACTGG	1595	36.650967	1
ACGCAGA	32670	35.931667	7
GGTTCAC	1370	35.6117	6
CGCAGAG	33085	35.61027	8
ACAACGC	515	34.658794	3
GCAGAGT	34105	34.510357	9
GTATAAC	640	34.485916	1