SRR3559738.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559738.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4962660
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	99168	1.9982831787791224	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43257	0.8716494783039741	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35158	0.7084507099015447	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14346	0.2890788407829672	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7226	0.14560739603357878	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6667	0.13434327558204673	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5518	0.11119036968077604	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	5495	0.11072690855307436	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5459	0.11000149113580217	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5371	0.10822824856024794	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	47080	57.95102	1
TATCAAC	59710	45.55714	2
ATCAACG	60490	44.8624	3
TCAACGC	61905	44.577023	4
CAACGCA	62405	44.296135	5
AACGCAG	64235	43.93265	6
CGCATAG	1075	43.834896	1
TAACGCA	1005	42.03377	4
ACGCAGA	71195	39.646168	7
CGCAGAG	72120	39.19937	8
GGTATCA	23915	38.585247	1
GCAGAGT	75230	37.49978	9
ACAACGC	1050	35.699104	3
TATCACG	820	33.376537	2
GTATAAC	1635	32.469353	1
AGAGTAC	73900	28.857893	10-11
AGTACTT	50165	28.574396	12-13
TACAACG	1275	28.465376	2
GTACAAC	1665	27.94356	1
GAGTACT	45725	27.653257	12-13