SRR3559729.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559729.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4695040
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	172966	3.684015471646674	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75507	1.6082291098691384	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54139	1.1531105166303162	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28192	0.6004634678298801	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17476	0.37222260087241005	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13982	0.29780363958560524	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12330	0.26261757088331517	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11679	0.24875187431842966	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7742	0.16489742366412213	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6207	0.13220334651035986	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5308	0.113055479825518	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4834	0.10295971919302072	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	58985	65.91171	1
TATCAAC	75245	51.64158	2
ATCAACG	77385	50.16789	3
CGCATAG	940	49.51725	1
TCAACGC	79300	49.451584	4
CAACGCA	80310	48.888935	5
AACGCAG	82030	48.625423	6
TACAACG	830	48.02796	2
TATCACG	830	45.877453	2
GGTATCA	26315	45.671562	1
ACGCAGA	91265	43.757225	7
CGCAGAG	92255	43.354	8
GCAGAGT	95830	41.649727	9
TAACGCA	845	38.022366	4
ACAACGC	1050	37.965366	3
TCACGCA	1120	35.061295	4
CATGGGT	8900	33.626373	4
TAGTACT	1515	32.988968	5
AAACGCA	1545	32.348408	5
AGATTAC	2015	31.298841	2