SRR3559726.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559726.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4148072
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	116775	2.815163285497455	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53147	1.2812458414415178	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38654	0.9318546061881279	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20129	0.4852615865876967	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13115	0.31617098256732284	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9779	0.23574807766113992	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8026	0.19348748044874822	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7438	0.1793122202314714	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7211	0.17383979834486962	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5545	0.13367656106258521	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	5017	0.1209477559695203	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4525	0.10908682395098251	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	46500	57.065025	1
CGCATAG	1085	46.73555	1
TATCAAC	58830	45.056126	2
ATCAACG	59800	44.176037	3
TCAACGC	61230	43.64909	4
CAACGCA	61990	43.3539	5
AACGCAG	63380	43.15409	6
TATCACG	645	40.588028	2
TAACGCA	695	40.235813	4
ACGCAGA	69880	39.114506	7
CGCAGAG	70815	38.667137	8
GCAGAGT	73700	37.088917	9
GGTATCA	24380	35.896706	1
TACAACG	1100	34.617226	2
ACAACGC	1115	33.617905	3
AGATTAC	1790	30.912552	2
ATAGTAC	1675	30.548042	4
GTACAAC	1520	29.828278	1
GTATAAC	1060	29.828278	1
TAGTACT	1755	29.494555	5