SRR3559713.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559713.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1203826
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29583	2.4574149420265057	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14246	1.1833936133627285	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11255	0.934935779755546	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6308	0.5239959927763647	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5483	0.455464494038175	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3417	0.28384500750108405	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2521	0.20941564644724403	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2133	0.1771850749194651	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1968	0.16347877517182716	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1858	0.15434124200673519	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	1412	0.11729269844645322	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	1329	0.11039801433097474	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACAACG	290	71.80723	2
CGCATAG	410	66.87822	1
TAACGCA	445	57.489502	4
GTATAAC	435	56.183052	1
TATCACG	255	53.664345	2
ATAACGC	520	52.632336	3
GTATCAA	14385	50.678913	1
GTACAAC	455	49.78321	1
AGATTAC	880	46.651394	2
ACAACGC	435	46.503735	3
AAACGCA	470	43.037113	5
GTATCAC	445	42.864788	1
GATTACT	970	42.32291	3
TATCAAC	17770	40.981907	2
ATAGTAC	690	40.525547	4
ATCAACG	18060	40.257946	3
TACGCAG	370	40.197624	5
TCAACGC	18570	40.04776	4
AACGCAG	19615	39.914402	6
CAACGCA	18855	39.72476	5