SRR3559695.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559695.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3173515
Sequences flagged as poor quality	0
Sequence length	125
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	113250	3.5685982262570053	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52968	1.6690641134514885	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36426	1.147812441409604	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19679	0.6201010551391754	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14466	0.45583524892745114	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10408	0.3279644180033811	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8867	0.27940627348539393	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7672	0.24175086615314564	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7126	0.22454596874443636	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5522	0.17400264375621355	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5262	0.16580983546635197	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4392	0.1383954384964306	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3964	0.1249088156192739	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	3756	0.11835456898738464	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3710	0.11690507213610146	No Hit
GTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3684	0.1160857913071153	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1185	68.42263	1
TACAACG	825	60.57596	2
TATCACG	690	59.494247	2
GTATCAA	44880	55.10171	1
TCACGCA	810	52.14846	4
TAACGCA	790	50.456352	4
AGATTAC	2060	47.653164	2
TAGTACT	1840	45.91187	5
ACAACGC	1115	45.35436	3
ATAGTAC	1845	44.821518	4
GGTTTCA	1905	44.12689	1
GTACAAC	1195	43.902973	1
TATCAAC	56630	43.52546	2
GCATAGT	1885	42.924232	2
ATCAACG	57915	42.570004	3
TCAACGC	59865	41.997616	4
AACGCAG	62745	41.87962	6
CAACGCA	60845	41.68165	5
AAACGCA	1520	41.48745	5
GTATCAC	1150	40.955143	1