SRR3559681.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559681.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3520698
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	101944	2.895562186816364	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46214	1.3126374372354572	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31559	0.8963847509783571	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16626	0.4722359032214634	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11254	0.3196525234484753	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8340	0.2368848449938052	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7972	0.22643237221710014	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6826	0.19388200862442617	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6767	0.1922062045651175	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	4940	0.14031308564381267	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4092	0.11622695272357925	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4011	0.11392627257435883	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	39560	59.40261	1
CGCATAG	960	57.750656	1
TATCACG	595	54.99542	2
TACAACG	675	53.765892	2
TATCAAC	50655	46.18192	2
ATCAACG	51760	45.06956	3
TCAACGC	53310	44.772827	4
AACGCAG	55790	44.412212	6
CAACGCA	54205	44.284115	5
ACGCAGA	61360	40.380665	7
CGCAGAG	62345	39.87627	8
ACAACGC	975	39.053154	3
GCAGAGT	64980	38.195164	9
TAACGCA	915	37.711098	4
TAGTACT	1570	36.376034	5
AGATTAC	1730	36.109707	2
ATAGTAC	1580	35.39428	4
GGTATCA	19660	35.325443	1
TCACGCA	905	34.840916	4
GTATCAC	1335	33.93732	1