SRR3559669.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559669.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2855809
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	51445	1.8014159910554242	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24726	0.8658142053617731	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15607	0.5465001335873653	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9535	0.3338808722852264	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9066	0.3174582053631738	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5952	0.20841729961632588	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3872	0.13558329706223352	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3787	0.1326069075347826	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3733	0.13071602477616676	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	21080	55.482388	1
TAACGCA	585	49.834408	4
TATCACG	450	43.638176	2
TATCAAC	27320	42.713196	2
ATCAACG	27300	42.693417	3
TCAACGC	27895	42.63591	4
CAACGCA	28335	42.12082	5
AACGCAG	29625	41.431435	6
CGCATAG	570	39.72045	1
TACAACG	615	39.67107	2
ACGCAGA	32695	37.431915	7
CGCAGAG	33305	36.76419	8
GCAGAGT	34580	35.339836	9
GTATAAC	950	35.121243	1
ACAACGC	775	33.010784	3
GGTATCA	11455	32.560024	1
CATGGGG	8715	28.67286	4
AGAGTAC	33930	28.345295	10-11
AGTACTT	21775	28.033562	12-13
GTACAAC	1180	27.770657	1