SRR3559668.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559668.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1275456
Sequences flagged as poor quality	0
Sequence length	125
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18928	1.4840182648401825	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9252	0.7253876260725576	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6224	0.4879823372974058	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4530	0.3551670931807918	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3811	0.29879509759646744	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2612	0.20478950273470822	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2100	0.16464699683877768	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1477	0.11580172110994029	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1456	0.1141552511415525	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACGCA	290	0.0	49.24219	4
GTATCAA	10330	0.0	44.746857	1
TATCACG	215	0.0	44.285007	2
CGCATAG	320	0.0	39.090427	1
TACAACG	275	0.0	38.95068	2
TCAACGC	12985	0.0	35.78765	4
ATCAACG	12755	0.0	35.77849	3
CAACGCA	13065	0.0	35.61406	5
AACGCAG	13480	0.0	35.532856	6
TATCAAC	12955	0.0	35.2776	2
ACAACGC	295	0.0	34.287357	3
ATCACGC	290	0.0	32.826843	3
ACGCAGA	14860	0.0	32.273075	7
CGCAGAG	15150	0.0	31.85168	8
GCAGAGT	15845	0.0	30.417038	9
GTATAAC	510	0.0	29.199196	1
TCTAACG	105	5.901379E-4	28.337132	2
AGATTAC	525	0.0	28.337132	2
CATGGGT	1455	0.0	28.216957	4
GATTACT	540	0.0	27.545668	3