SRR3559667.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559667.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3627168
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	69446	1.9146066573150184	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33556	0.9251294673971538	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20874	0.5754902998703121	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12800	0.35289239428667213	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9762	0.26913559008019483	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7120	0.1962963943219614	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5309	0.14636763447405798	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5122	0.14121209715127614	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4888	0.13476078306822292	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3883	0.10705321617305844	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3687	0.10164955138554377	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	28585	55.292046	1
TATCAAC	36825	42.75466	2
ATCAACG	37040	42.42149	3
TCAACGC	37840	41.9806	4
CAACGCA	38250	41.6706	5
AACGCAG	39370	41.25587	6
ACGCAGA	43535	37.254246	7
CGCAGAG	44315	36.74621	8
CGCATAG	670	35.567127	1
GCAGAGT	46405	35.0143	9
CATGGGT	5565	33.356304	4
GGTATCA	15265	31.651014	1
TATCACG	420	31.16806	2
ACATGGG	28775	29.360367	3
TAACGCA	615	29.022486	4
CATGGGG	10955	28.621128	4
AGTACTT	28480	28.306604	12-13
GTACATG	32100	28.042908	1
AGAGTAC	45120	27.961319	10-11
TACATGG	32110	27.944569	2