SRR3559657.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559657.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2727690
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46932	1.720576751756981	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23889	0.8757960032115087	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14397	0.5278092451854866	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8959	0.3284464143652688	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8863	0.3249269528428817	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5663	0.20761156876331252	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4239	0.15540622284790426	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3687	0.1351693190941786	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3633	0.13318962198783585	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3029	0.11104634324281717	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	21765	50.610264	1
TAACGCA	480	49.582615	4
TACAACG	525	47.603676	2
TATCACG	375	46.016884	2
CGCATAG	565	43.23105	1
ATCAACG	27665	39.46536	3
ACAACGC	635	39.35376	3
TATCAAC	27810	39.348774	2
TCAACGC	28250	39.322086	4
CAACGCA	28565	39.117584	5
AACGCAG	29465	38.79034	6
ACGCAGA	32320	35.363785	7
CGCAGAG	32855	34.860367	8
CATGGGT	4265	33.760357	4
GCAGAGT	34350	33.325836	9
GTATAAC	910	31.42391	1
GTACAAC	1055	29.928417	1
AGTACTT	20775	28.381498	12-13
ACATGGG	22040	27.994831	3
GGTATCA	12525	27.872776	1