SRR3559637.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559637.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6569521
Sequences flagged as poor quality	0
Sequence length	125
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	109914	1.6730900167607348	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52335	0.796633422741171	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31070	0.4729416345575271	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19819	0.3016810510233547	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16104	0.2451320271295274	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12021	0.18298137718107607	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8655	0.13174476495318305	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8504	0.12944627165359543	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7737	0.11777114343648493	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	44700	57.73839	1
TATCAAC	58175	44.23102	2
ATCAACG	58120	44.121807	3
TCAACGC	58895	44.07697	4
CAACGCA	59650	43.608852	5
AACGCAG	61195	43.13983	6
ACGCAGA	67850	38.93481	7
CGCAGAG	69370	38.184616	8
CGCATAG	1035	37.41595	1
GCAGAGT	73135	36.218864	9
TATCACG	930	33.273468	2
GGTATCA	22910	31.44018	1
CATGGGG	20415	28.707262	4
AGAGTAC	71000	28.651062	10-11
AGTACTT	44260	28.317074	12-13
ACATGGG	47915	28.06329	3
GTACATG	51065	27.954214	1
TACATGG	51800	27.330172	2
TAACGCA	785	27.285868	4
CATGGGT	8575	27.199247	4