SRR3559632.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559632.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3527359
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	83016	2.353488828327369	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40554	1.1496986839162104	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25611	0.7260672928386366	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15935	0.451754414563417	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12430	0.3523882882349089	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9342	0.26484403770639736	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6977	0.19779670852895895	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6718	0.19045410461481238	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6709	0.19019895621625132	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5321	0.15084940319372084	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5072	0.14379029750019773	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4825	0.1367878914507993	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	3927	0.11132975123881635	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3709	0.10514949002922583	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	36060	55.77404	1
CGCATAG	555	49.376495	1
TATCAAC	45655	43.97387	2
ATCAACG	46565	43.021397	3
TCAACGC	47835	42.476223	4
CAACGCA	48380	42.108414	5
AACGCAG	49740	41.65086	6
TAACGCA	570	40.70903	4
ACGCAGA	54680	37.822674	7
CGCAGAG	55315	37.463776	8
GCAGAGT	57900	35.739788	9
TTAGGAC	1100	32.45335	3
GTATAAC	900	32.43463	1
AGTGTAC	1345	31.850128	3
TATCACG	710	31.846605	2
GGTATCA	19300	31.700676	1
TACTGGT	2515	30.75695	2
TACAACG	685	30.402924	2
AGAGTAC	56640	28.425331	10-11
AGTACTT	38340	28.166021	12-13