SRR3559630.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559630.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3630549
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	94137	2.592913633723164	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45552	1.2546862747204348	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28580	0.7872087664978492	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16446	0.4529893412814426	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13692	0.37713304516754903	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9840	0.2710333891651097	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	7631	0.21018859682103175	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7378	0.20321995378660362	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6945	0.19129338290159423	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5683	0.1565327998602966	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4659	0.12832769919921203	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4651	0.1281073468502973	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3874	0.10670562496195479	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	3678	0.10130699241354406	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	38920	54.63785	1
CGCATAG	665	43.007034	1
TATCAAC	49490	42.975826	2
ATCAACG	50195	42.22123	3
TCAACGC	51515	41.659096	4
CAACGCA	51985	41.36257	5
AACGCAG	53095	41.27105	6
TACAACG	570	40.717106	2
ACGCAGA	58340	37.591213	7
CGCAGAG	59010	37.234463	8
GCAGAGT	61500	35.678555	9
TAACGCA	570	32.358192	4
GGTATCA	21225	30.7949	1
TATCACG	665	29.531088	2
AGTACTT	39060	29.405529	12-13
GACCGTT	810	29.381393	7
CATGGGG	11255	28.863207	4
CATGGGT	4905	28.50534	4
AGAGTAC	60355	28.079826	10-11
GAGTACT	35875	27.588133	12-13