SRR3559627.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559627.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3960279
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	79871	2.0168023515514943	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37753	0.9532914221447528	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24391	0.6158909511173329	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14421	0.36414101127723575	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13280	0.3353299098371605	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8323	0.2101619608113469	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6050	0.15276701464720036	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5632	0.14221220272612106	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5627	0.14208594899500768	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	35940	54.68301	1
TATCAAC	44505	43.892338	2
AACGCAG	46220	43.855038	6
ATCAACG	44810	43.416027	3
TCAACGC	45865	43.130802	4
CAACGCA	46415	42.82481	5
ACGCAGA	51260	39.566326	7
CGCAGAG	52030	39.129425	8
CGCATAG	755	37.897087	1
GCAGAGT	54750	37.207195	9
TAACGCA	740	36.179127	4
TATCACG	610	36.09097	2
ACAACGC	825	33.89387	3
TACAACG	825	32.45527	2
CATGGGG	12340	31.145452	4
GGTATCA	19295	29.843094	1
AGAGTAC	53585	28.911793	10-11
ACATGGG	32840	28.841457	3
AGTACTT	35400	28.798815	12-13
AAACGCA	1265	28.218763	5