SRR3559625.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559625.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2632591
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54305	2.062796689649095	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25418	0.965512683132321	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17812	0.6765957947892399	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10182	0.38676725704828435	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8779	0.3334737526642004	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5951	0.2260510652813141	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3970	0.15080200456508436	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3746	0.1422932768515884	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3024	0.11486782413219525	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	23675	54.835453	1
CGCATAG	595	48.08591	1
AACGCAG	30740	44.341022	6
TATCAAC	29565	43.87537	2
ATCAACG	29825	43.40731	3
TCAACGC	30705	43.03521	4
TACAACG	570	42.80073	2
CAACGCA	31265	42.530804	5
TATCACG	410	40.63651	2
ACGCAGA	34410	39.577244	7
CGCAGAG	34725	39.303898	8
GCAGAGT	36450	37.394867	9
ACAACGC	665	36.681465	3
CATGGGT	4110	34.597168	4
GGTATCA	12660	32.29862	1
TAACGCA	475	31.313444	5
ACATGGG	22660	30.929283	3
CATGGGG	8525	30.916748	4
GTACATG	23660	30.71019	1
TACATGG	24040	30.370525	2