SRR3559614.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559614.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2647967
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37662	1.4222986917888327	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17833	0.673460054449319	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12298	0.4644317697312693	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7209	0.2722465952181428	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7133	0.26937646881551014	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4387	0.16567427010986163	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3744	0.14139149015074584	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2937	0.11091527953331745	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2678	0.10113419087171405	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	19595	48.65318	1
TATCACG	430	41.517544	2
TAACGCA	395	40.669003	4
AACGCAG	24950	39.53839	6
TCAACGC	24590	39.269634	4
ATCAACG	24110	39.187733	3
CAACGCA	24760	39.144188	5
TATCAAC	24405	38.843273	2
ACGCAGA	27325	35.992973	7
CGCAGAG	27930	35.21332	8
GCAGAGT	29435	33.473515	9
ACAACGC	570	31.31434	3
CGCATAG	515	30.10053	1
TACAACG	595	29.004131	2
CATGGGG	7740	28.672445	4
GGTATCA	11525	27.832321	1
ACATGGG	19235	27.158089	3
AGAGTAC	28685	26.871235	10-11
AGTACTT	17775	26.728493	12-13
GTACATG	21275	26.28702	1