SRR3559607.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559607.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4265281
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	78922	1.8503353003002616	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	39331	0.9221197853084004	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25387	0.5952011133615815	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13162	0.30858459266810323	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9797	0.22969178349562433	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7296	0.17105555296356795	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6299	0.1476807741389137	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5557	0.1302844994268842	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5191	0.1217035876417052	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	37410	55.1339	1
CGCATAG	730	48.981625	1
AACGCAG	47975	44.14905	6
TATCAAC	47255	43.555206	2
ATCAACG	47335	43.3131	3
TCAACGC	48490	42.98078	4
CAACGCA	49030	42.519543	5
TATCACG	595	42.00197	2
ACGCAGA	53040	39.82091	7
CGCAGAG	53635	39.491016	8
GCAGAGT	56965	37.224266	9
TAACGCA	705	36.288223	4
CATGGGT	6985	34.666847	4
GGTATCA	19950	34.233124	1
CATGGGG	12705	31.843489	4
ACAACGC	900	31.7311	3
ACATGGG	34820	30.738932	3
TACAACG	885	30.255653	2
GTACATG	37015	30.05878	1
TACATGG	37600	29.577316	2