SRR3559592.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559592.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2730782
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	100488	3.679825046451896	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46760	1.7123300212173655	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30994	1.134986242036164	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16734	0.6127915007496021	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13123	0.48055831626252116	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9226	0.3378519413120491	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7389	0.27058183333565256	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6847	0.2507340388211142	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4708	0.17240482762812998	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	3670	0.13439373776449381	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3510	0.1285346102325268	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3120	0.11425298687335717	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	37595	59.4226	1
TACAACG	485	58.89331	2
CGCATAG	565	52.775887	1
TATCAAC	47140	47.489292	2
AACGCAG	48590	47.19106	6
ATCAACG	48195	46.35482	3
TCAACGC	49455	45.823444	4
CAACGCA	50120	45.22732	5
ACGCAGA	53710	42.670334	7
CGCAGAG	54190	42.358246	8
ACAACGC	715	41.60552	3
GCAGAGT	56540	40.576645	9
TAACGCA	560	38.247356	4
GGTATCA	18540	37.088013	1
TATCACG	470	36.716953	2
GTACAAC	900	36.44468	1
AGATTAC	1125	34.91065	2
GACCGTT	650	32.95217	7
TCACGCA	590	32.268955	4
GGACCGT	935	31.180235	6