SRR3559582.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559582.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3480221
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59168	1.7001219175448914	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31302	0.8994256399234417	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28796	0.8274187185239099	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24728	0.7105295899312142	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13670	0.39279114745873894	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12044	0.3460699765905671	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8738	0.2510760092534353	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6809	0.19564849473639748	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6114	0.17567849857810755	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5134	0.14751936730454762	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5074	0.1457953388592276	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	5028	0.14447358371781563	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4757	0.13668672190645365	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	4502	0.12935960101384367	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4373	0.12565293985640566	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4070	0.1169465962075397	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3541	0.10174641208130174	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1060	60.078106	1
TAACGCA	895	54.548203	4
GTATAAC	970	52.645763	1
TATCACG	690	45.7316	2
ATAGTAC	1465	42.265434	4
TCACGCA	805	40.677704	4
TACAACG	965	39.485924	2
AGATTAC	1845	39.36888	2
ACAACGC	985	39.28862	3
GTATCAA	38440	37.90047	1
TAGTACT	1675	37.293514	5
ACGCATA	365	36.21146	1
ATCACGC	895	35.921986	3
GTACAAC	1335	34.651794	1
GCATAGT	1890	33.706337	2
GGTTTCA	1795	33.469696	1
GATTACT	2160	33.35195	3
ATAACGC	1655	33.096302	3
TACTGGT	2075	32.42276	2
GTATCAC	1370	32.01242	1