SRR3559529.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559529.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3520030
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	79458	2.2573103070144285	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37473	1.064564790640989	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26523	0.7534878964099737	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15524	0.4410189685883359	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14323	0.40689994119368306	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9668	0.27465675008451634	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8378	0.2380093351477118	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6070	0.17244171214449877	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6032	0.1713621758905464	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5419	0.15394755158336718	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	4204	0.11943080030567921	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4148	0.11783990477353887	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3924	0.11147632264497746	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3607	0.10247071757911155	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	940	59.995213	1
TATCACG	565	51.65019	2
GTATCAA	36120	49.248566	1
TACAACG	805	48.08856	2
TAACGCA	885	45.087467	4
ACAACGC	900	42.35081	3
GTATAAC	1040	40.381393	1
TATCAAC	45385	39.078384	2
ATCAACG	45440	38.939342	3
TCAACGC	46670	38.729794	4
AACGCAG	48890	38.34114	6
CAACGCA	47430	38.317284	5
TAGTACT	1545	38.119164	5
ATAGTAC	1515	37.738346	4
AGATTAC	1695	35.83891	2
ACGCAGA	53160	35.260944	7
CGCAGAG	54000	34.92175	8
AAACGCA	1200	34.206173	5
GCATAGT	1690	34.18293	2
ACGCATA	370	34.05134	1