SRR3559525.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559525.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2170843
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40545	1.867707614046709	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18516	0.8529405396889597	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13805	0.6359280703394948	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6384	0.294079304675649	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4788	0.2205594785067368	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4610	0.21235989889641949	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3139	0.14459820447632554	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3029	0.13953104853736542	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	2978	0.13718173078384757	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2421	0.11152349571111315	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2319	0.10682486020407739	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	445	57.924286	1
GTATCAA	20245	49.3002	1
TATCAAC	25745	38.531055	2
ATCAACG	25810	38.365696	3
TCAACGC	26450	38.09022	4
AACGCAG	27540	37.933167	6
TAACGCA	425	37.828022	4
CAACGCA	26845	37.740685	5
AAACGCA	665	35.784657	5
ACGCAGA	29850	34.776802	7
CGCAGAG	30380	34.24842	8
AGATTAC	1140	33.94981	2
GCAGAGT	31905	32.555473	9
TACAACG	440	32.47786	2
GATTACT	1200	31.756859	3
TATCACG	380	31.338285	2
TAGTACT	855	31.311577	5
CATGGGG	6400	30.888508	4
ATAGTAC	840	30.480917	4
CATGGGT	2720	30.20988	4