SRR3559463.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559463.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2317651
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52473	2.264059601726058	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23686	1.0219830336836737	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16535	0.7134378730878809	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9068	0.3912582179111523	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8335	0.3596313681395516	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5439	0.23467726590414173	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5324	0.22971534540791516	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4399	0.18980424576435365	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3723	0.16063678267349138	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3721	0.1605504884039918	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2729	0.11774853073219393	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	2452	0.10579677440650037	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	23405	51.67411	1
TATCACG	400	50.606705	2
CGCATAG	470	44.76348	1
TACAACG	400	44.652973	2
TATCAAC	29265	40.81046	2
ATCAACG	29410	40.487793	3
TCAACGC	30185	40.15834	4
AACGCAG	31265	39.823895	6
CAACGCA	30560	39.730366	5
CATGGGG	7355	36.750423	4
ACGCAGA	34160	36.396645	7
CATGGGT	2970	36.08321	4
CGCAGAG	34865	35.831303	8
GCAGAGT	36170	34.58786	9
TAACGCA	435	32.848164	4
GTATCAC	865	31.966522	1
ACATGGG	21405	31.736538	3
TCACGCA	620	31.689209	4
ATGGGGG	4575	31.077045	5
TACATGG	24280	30.160988	2