SRR3559413.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559413.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4755024
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	120285	2.5296402289452167	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	55431	1.1657354410829472	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37415	0.7868519696220251	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22036	0.463425631500493	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18715	0.3935837127215341	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12295	0.25856862131505537	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	9995	0.21019872875510198	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9506	0.19991486898909447	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9035	0.1900095562083388	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	7902	0.16618212652554434	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	7723	0.1624176870610958	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	6668	0.14023062764772584	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	5929	0.12468917086433214	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	5715	0.1201886678174495	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5702	0.1199152727725454	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	4856	0.10212356446571036	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	49515	55.780106	1
TAACGCA	930	47.386986	4
TATCAAC	62585	44.076653	2
ATCAACG	63790	43.17869	3
TCAACGC	65330	42.7625	4
CAACGCA	65610	42.74712	5
CGCATAG	1120	42.186283	1
AACGCAG	67630	42.15653	6
GTATAAC	1395	39.44353	1
ACGCAGA	74005	38.525047	7
CGCAGAG	74980	38.080395	8
GCAGAGT	77440	36.69412	9
AGATTAC	2030	32.85733	2
GTACTGG	4125	32.62276	1
ATAACGC	1700	32.579494	3
GGTATCA	26505	32.35814	1
CATGGGT	5635	31.600037	4
TACTGGT	3505	31.09377	2
TATCACG	780	30.54047	2
TACAACG	1025	30.212717	2