SRR3559381.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559381.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4373810
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	122785	2.8072778652936456	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	56405	1.2896079162103522	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35521	0.8121294706445868	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21552	0.49275117117570266	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16218	0.37079799991311924	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11478	0.26242566549530044	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	10223	0.23373214657243913	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9770	0.22337504372617922	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8560	0.19571037607943645	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	7693	0.17588784149288605	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	7265	0.16610232268891426	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	6975	0.1594719477983726	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	5551	0.1269145207496439	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	5180	0.11843221356208888	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	5020	0.11477407569144521	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	4976	0.11376808777701822	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	49100	57.30803	1
TATCAAC	61935	45.47071	2
CGCATAG	1035	45.070415	1
ATCAACG	63245	44.444122	3
TCAACGC	64980	43.83482	4
CAACGCA	65220	43.73225	5
AACGCAG	67230	43.247757	6
TACAACG	1035	42.003075	2
TAACGCA	745	40.767345	4
ACGCAGA	73795	39.360035	7
CGCAGAG	74585	39.039246	8
ACAACGC	1080	38.598717	3
GCAGAGT	77335	37.48188	9
TCACGCA	875	35.391083	4
GACCGTT	895	34.546032	7
TATCACG	865	33.73483	2
GGTATCA	25445	33.140114	1
GTACAAC	1420	32.85062	1
GTACTGG	3925	32.607044	1
TACTGGT	3285	32.450115	2