SRR3559371.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559371.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2194029
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	57033	2.599464273261657	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26333	1.2002120300141885	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18585	0.8470717570278242	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9655	0.44005799376398397	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7972	0.36334980075468465	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5765	0.26275860528735034	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4495	0.20487422910089154	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4086	0.18623272527391388	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3328	0.15168441255790147	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2994	0.13646127740335245	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	2342	0.1067442590777059	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	20590	63.493187	1
TATCAAC	26445	49.059383	2
ATCAACG	26930	48.109516	3
TCAACGC	27785	47.400524	4
CAACGCA	28055	47.03521	5
CGCATAG	575	46.739323	1
AACGCAG	28870	46.40806	6
TAACGCA	435	45.168236	4
TACAACG	380	42.3047	2
ACGCAGA	31935	41.91673	7
CGCAGAG	32385	41.51799	8
GGTATCA	9600	41.059196	1
GCAGAGT	33775	39.809334	9
ATAGTAC	770	34.796074	4
GTACAAC	615	33.988396	1
TATCACG	335	33.768925	2
CATGGGT	2865	33.458748	4
CATGGGG	7535	33.42455	4
GTACTGG	1565	32.818737	1
GTATAAC	695	32.65401	1