SRR3559366.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559366.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2127633
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	65716	3.088690577745316	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31111	1.4622352633184388	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21314	1.0017705121136964	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11676	0.5487788542478895	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10477	0.49242515039012835	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6847	0.3218130194446128	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5469	0.2570462105071692	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4945	0.2324179028996072	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4721	0.2218897714032448	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3757	0.17658120549925668	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	3675	0.17272715736219546	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3200	0.1504018785194627	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3132	0.14720583860092412	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	2595	0.1219665233618768	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	2584	0.12144951690446615	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2531	0.11895848579148753	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2381	0.11190839773588773	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACAACG	410	59.536404	2
GTATCAA	26260	53.79362	1
CGCATAG	665	52.09556	1
TAACGCA	550	46.546642	4
TCACGCA	415	45.90759	4
ACAACGC	545	45.881264	3
TATCACG	400	44.6523	2
GTATAAC	610	44.0633	1
TATCAAC	32730	43.12888	2
ACGCATA	295	42.51984	1
ATCAACG	33280	42.380333	3
TCAACGC	34460	41.620197	4
CAACGCA	34730	41.524475	5
GGTTTCA	1195	41.486286	1
AACGCAG	35755	41.4822	6
ATAGTAC	915	39.690937	4
AGATTAC	1190	39.52417	2
ACGCAGA	39315	37.635162	7
TACTGGT	1355	37.34756	2
CGCAGAG	39725	37.306637	8