SRR3559363.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559363.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4185419
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	94092	2.248090334563875	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43897	1.048807777668138	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29026	0.6935028488187205	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15688	0.37482507725033026	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13076	0.3124179442966164	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9694	0.23161360905562858	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7049	0.16841802457531732	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6856	0.16380677776824734	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6681	0.15962559543023053	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5170	0.12352407250026819	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	5131	0.12259226615065302	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4562	0.10899745043447262	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	37015	57.35484	1
TATCAAC	47235	44.790287	2
ATCAACG	47570	44.349728	3
CAACGCA	49220	43.744457	5
TCAACGC	49035	43.716694	4
TATCACG	715	43.293995	2
AACGCAG	50755	43.218567	6
ACGCAGA	55750	39.43171	7
CGCATAG	995	39.012024	1
CGCAGAG	56670	38.980537	8
GCAGAGT	59340	37.216583	9
TACAACG	795	35.94218	2
GGTATCA	19210	35.15956	1
TCACGCA	1010	32.416916	4
TAACGCA	790	32.401993	4
CATGGGG	12990	29.10013	4
AGAGTAC	57910	28.956648	10-11
GTATCAC	1405	28.90286	1
ATCACGC	1160	28.738256	3
AGTACTT	39410	28.677761	12-13