SRR3559362.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559362.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1993202
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59545	2.9874041868310384	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26636	1.336342227230356	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18753	0.9408479421553863	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10463	0.5249342515209197	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10113	0.507374566150345	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6448	0.32349957505561405	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5293	0.2655526133327179	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4440	0.22275715155814615	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4269	0.21417799099137969	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3689	0.1850790838058561	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	3059	0.15347165013882186	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	3001	0.1505617594202695	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2734	0.1371662280090026	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2604	0.13064405915707492	No Hit
GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC	2301	0.11544238867912034	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2088	0.10475606586788494	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	2029	0.10179600461970237	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACAACG	485	60.153847	2
TAACGCA	595	53.035656	4
TATCACG	330	52.323055	2
CGCATAG	555	51.644478	1
GTATCAA	26605	51.061523	1
ACAACGC	580	50.301064	3
TCACGCA	405	47.043976	4
GTACAAC	675	46.88649	1
GTATAAC	730	45.807945	1
TATCAAC	32770	41.207443	2
ATCAACG	33355	40.395466	3
TCAACGC	34455	39.866158	4
CAACGCA	34830	39.645405	5
AACGCAG	35900	39.507812	6
GTACTGG	1540	38.387524	1
GGTTTCA	1170	37.767784	1
ACGCAGA	39180	36.063705	7
CGCAGAG	39545	35.92642	8
AAACGCA	875	35.356274	5
TACTGGT	1410	35.048386	2