SRR3559345.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559345.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2371949
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	70866	2.9876696337062896	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33363	1.4065648123125751	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22255	0.9382579473673338	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13068	0.5509393330126406	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11468	0.48348425703925335	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8215	0.34633965570086034	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5559	0.23436422958503744	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5306	0.22369789569674559	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3155	0.13301297793502306	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2779	0.11716103508127704	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	2581	0.10881346942957038	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	19900	69.59218	1
GGTATCA	8275	54.27034	1
CGCATAG	725	53.541195	1
TATCAAC	26800	51.361214	2
TACAACG	535	51.19014	2
ATCAACG	26990	50.888287	3
TCAACGC	28260	49.928593	4
CAACGCA	28705	49.24577	5
AACGCAG	29690	48.87442	6
ACGCAGA	32885	44.089756	7
CGCAGAG	33600	43.36402	8
ACAACGC	620	43.21096	3
GCAGAGT	35250	41.30046	9
AGATTAC	1235	38.083984	2
TATCACG	395	37.68124	2
ATAGTAC	1085	37.31232	4
TAACGCA	495	37.28461	4
CATGGGG	6575	35.856884	4
GTACAAC	835	35.759895	1
CATGGGT	3485	35.533146	4