SRR3559283.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559283.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2117966
Sequences flagged as poor quality	0
Sequence length	125
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43614	2.0592398555973044	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21826	1.030517014909588	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15449	0.7294262514129122	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10118	0.47772249412880097	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8804	0.41568183814093335	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6087	0.287398381277131	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4353	0.20552737862647463	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3711	0.17521527729906902	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3474	0.16402529596792392	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3239	0.15292974485898264	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	2846	0.1343742061959446	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	2599	0.12271207375378075	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	2416	0.11407170842213708	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	2137	0.10089869242471314	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	580	53.8008	1
GTATCAA	20580	50.881912	1
TATCACG	330	48.701317	2
TAACGCA	460	46.58607	4
TACAACG	410	43.554024	2
TACTGGT	1895	43.34717	2
GTACTGG	2245	42.50051	1
AACGCAG	25990	41.89195	6
TATCAAC	25150	41.37084	2
ATCAACG	25500	40.7349	3
GTATAAC	605	40.666973	1
TCAACGC	26340	40.294613	4
CAACGCA	26780	39.811924	5
GGTTCAC	2040	39.372173	6
ACTGGTT	2100	38.83405	3
ACGCAGA	28720	37.90988	7
ACAACGC	490	37.659714	3
CGCAGAG	29070	37.555786	8
ATAGTAC	845	37.33624	4
CATGGGG	7520	36.25426	4