SRR3559265.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559265.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3357529
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	78774	2.346189712732191	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38985	1.161121765441192	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25577	0.7617804641449113	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17944	0.5344406556131012	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15254	0.45432221136436945	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11100	0.3306002718070343	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7107	0.21167352538131465	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	6842	0.2037808161895251	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6630	0.19746664883609344	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	4448	0.13247837918898095	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4426	0.13182313540702106	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	4138	0.12324539862500071	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	3965	0.11809279979413431	No Hit
GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT	3579	0.10659624980156539	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	670	59.529938	2
GTATCAA	33365	54.891132	1
CGCATAG	850	51.58695	1
AACGCAG	42560	45.052856	6
TCACGCA	925	44.406776	4
TATCAAC	41805	43.688038	2
ATCAACG	42335	43.057373	3
TACAACG	650	43.044724	2
TCAACGC	43700	42.543423	4
CAACGCA	44425	41.929462	5
GTATCAC	1050	41.760864	1
ATCACGC	950	41.35826	3
ACGCAGA	46985	40.746517	7
CGCAGAG	47460	40.50167	8
TAACGCA	825	40.408802	4
GCAGAGT	49905	38.433918	9
CATGGGT	5675	38.07875	4
AGATTAC	1680	37.9149	2
GTACTGG	3000	37.842205	1
TACTGGT	2815	36.79648	2