SRR3559130.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559130.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4501079
Sequences flagged as poor quality	0
Sequence length	125
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	88612	1.9686835089986203	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42495	0.9441069574650879	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33344	0.7408001503639461	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26516	0.5891031905905229	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	23910	0.5312059619482351	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18708	0.4156336736147044	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14105	0.3133693054487602	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8621	0.19153185269576473	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7138	0.15858419725581355	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6690	0.1486310282490043	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	5429	0.12061552352224877	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4511	0.1002204138163316	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1295	57.540382	1
TATCACG	825	51.24111	2
TAACGCA	1125	48.691086	4
TACAACG	950	45.75235	2
GTATCAA	45240	45.308525	1
TCACGCA	1000	44.65555	4
TAGTACT	2005	40.6507	5
ATAGTAC	1960	39.18752	4
AGATTAC	2300	37.53655	2
TATCAAC	55610	36.84223	2
TCAACGC	57115	36.49691	4
ATCAACG	56045	36.471287	3
AACGCAG	59905	36.13979	6
CAACGCA	57895	36.05821	5
ATCACGC	1190	36.024643	3
GCATAGT	2170	35.39518	2
GTATAAC	1665	35.008884	1
AAACGCA	1680	33.995686	5
ACAACGC	1305	33.762558	3
ATAACGC	1785	33.35615	3