SRR3559126.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3559126.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7828999
Sequences flagged as poor quality	0
Sequence length	125
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	115148	1.4707882834063462	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	60726	0.7756547165225082	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	44177	0.5642739256959926	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33929	0.43337596543312884	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23960	0.3060416791469765	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20720	0.2646570781271016	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17498	0.22350239155733703	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	12554	0.1603525559270093	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10112	0.12916082886202948	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	10022	0.12801125661147741	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8999	0.11494445203020208	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCACG	1180	47.42034	2
CGCATAG	1960	46.274292	1
GTATCAA	65825	44.45651	1
TACAACG	1540	42.51976	2
TAACGCA	1840	41.73407	4
GTATAAC	1970	40.856155	1
ACAACGC	1855	36.26214	3
AACGCAG	87680	35.64383	6
CAACGCA	84520	35.574318	5
TCAACGC	83820	35.57314	4
ATCAACG	81975	35.422497	3
TATCAAC	82845	35.10799	2
TAGTACT	2685	34.786938	5
AGATTAC	3900	34.037613	2
ATAGTAC	2800	32.740215	4
ACGCAGA	96055	32.461727	7
CGCAGAG	97585	32.068607	8
GTACAAC	2520	31.224083	1
GATTACT	4245	30.990847	3
GCAGAGT	101545	30.689508	9