SRR3558736.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558736.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6182317
Sequences flagged as poor quality	0
Sequence length	125
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	125292	2.0266188226841164	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	60827	0.9838867854883533	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	39716	0.6424128688321871	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	25530	0.41295197253715715	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21802	0.35265095594418727	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	19307	0.31229391828338793	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16377	0.2649006836757158	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12022	0.1944578383800119	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	11379	0.18405720703095618	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9784	0.1582578182257558	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	8725	0.1411283180723344	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8409	0.13601696580747963	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	8406	0.1359684403112943	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	7769	0.12566485995460924	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG	6724	0.10876181211671936	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	6533	0.10567235552625336	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	6369	0.10301962840145532	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC	6233	0.10081980590772036	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	1395	60.39402	1
TAACGCA	1295	43.186905	4
TATCACG	1140	42.795982	2
GTATCAA	77510	40.648926	1
TACAACG	1145	37.93249	2
AGATTAC	3135	36.81783	2
ATAGTAC	2425	35.33009	4
TCACGCA	1470	34.402943	4
GATTACT	3415	33.79909	3
TATCAAC	93645	33.63515	2
GTATAAC	1905	33.561226	1
ATCAACG	94700	33.19133	3
TCAACGC	96845	33.082817	4
AACGCAG	100225	33.04134	6
CAACGCA	98115	32.769547	5
ATAACGC	2135	31.76881	3
TAGTACT	2745	31.644701	5
ATCACGC	1630	31.025967	3
GCATAGT	2870	30.681303	2
ACGCAGA	108390	30.557829	7