SRR3558685.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3558685.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2662506
Sequences flagged as poor quality	0
Sequence length	125
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	106785	4.010695187165775	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	47210	1.7731415440941727	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35347	1.3275838627218117	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18367	0.6898388210204972	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10427	0.3916235306136399	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8654	0.3250321313829903	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7792	0.29265661748743477	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6896	0.25900411116444433	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	5271	0.19797138485321722	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAAATCGC	4671	0.17543622436907183	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGT	4418	0.16593389836492387	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	3899	0.1464409845461381	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGATA	3793	0.14245977286060577	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGTGCATTTT	3336	0.12529549229184836	No Hit
ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAAC	3177	0.11932367476354983	No Hit
GGTTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2945	0.11061007937634695	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG	2813	0.10565234406983495	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	36900	62.984104	1
TACAACG	530	59.49771	2
CGCATAG	755	54.532074	1
TATCAAC	46870	49.596233	2
ATCAACG	48285	47.970295	3
TCAACGC	49815	47.201637	4
CAACGCA	50450	46.642902	5
AACGCAG	51505	46.48457	6
GGTATCA	17280	46.409344	1
ACAACGC	740	43.417248	3
AGATTAC	1215	42.113605	2
ACGCAGA	57315	41.668636	7
GTACAAC	845	41.662487	1
CGCAGAG	57670	41.519207	8
ATAGTAC	990	41.468098	4
TCACGCA	580	41.0329	4
GCAGAGT	59945	39.81445	9
AGTGTAC	1215	36.726982	3
TACTGGT	1990	35.57903	2
TATCACG	605	35.403595	2